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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0539
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    73   1e-14
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    67   5e-13
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    65   2e-12
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    65   2e-12
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    61   3e-11
AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse t...    61   4e-11
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    60   8e-11
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    58   3e-10
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    55   2e-09
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           53   9e-09
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    52   1e-08
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    52   2e-08
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    52   2e-08
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    51   3e-08
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    44   4e-06
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    36   0.002
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   3.8  
AY324311-1|AAQ89696.1|  158|Anopheles gambiae insulin-like pepti...    23   6.6  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 72.5 bits (170), Expect = 1e-14
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
 Frame = -2

Query: 491 VAPSEIRKVILSIK-SNAVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFPFLWRRA 315
           V+   + +V+  +K S   G D I   ++I   D L P +  I N SL  G FP LW+  
Sbjct: 470 VSSETVVQVLFGLKRSFTPGPDGIPASVLINCKDVLAPHLAKIFNLSLSLGVFPALWKSC 529

Query: 314 YVRALPKIPDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFNNSLISPFQSGFRPGHS 135
           ++  + K    S+ +++R I+     +K  E+C+   +      +S ISP Q GF PG S
Sbjct: 530 WLFPVHKKGCRSIVSNYRGITQTCATAKTFELCIFPTILHSC--SSAISPKQHGFMPGRS 587

Query: 134 TISALLKVTGDIRVGLEESKITILVLVDFSNAFNTVCHDILLS 6
           T + L+    +I    E       +  DF  AF+++ H +LL+
Sbjct: 588 TSTNLMSFVTNIFRSFEAGTQLDAIYTDFHAAFDSLPHSLLLA 630


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 66.9 bits (156), Expect = 5e-13
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 6/156 (3%)
 Frame = -2

Query: 479 EIRKVILSIK-SNAVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFPFLWRRAYVRA 303
           E++++  S+    A G DNI        +              L++G FP  W+R  +  
Sbjct: 417 ELKEIARSLNPKKAPGDDNIPNMAAAAAILAFPEVFAKSYKQLLEAGTFPDAWKRQQLVL 476

Query: 302 LPKI-PDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFNNSLISPFQSGFRPGHSTIS 126
           L K    P  P+ +RPI +L  L K+LE  + ++L+  + +   +S  Q GFR G ST+ 
Sbjct: 477 LTKSGKPPGEPSSYRPICLLSVLGKILERLIQRRLTTHLESTGGLSDPQYGFRKGRSTVD 536

Query: 125 ALLKVTGDIRVGLEE----SKITILVLVDFSNAFNT 30
           A+ +V  + +V L++     ++  +V VD  NA N+
Sbjct: 537 AITRVMNNGKVALDKKRKGDRLCAVVTVDVRNALNS 572


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 65.3 bits (152), Expect = 2e-12
 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
 Frame = -2

Query: 527 RRPDVVPFQLFPVAPSEIRKVILSIK-SNAVGYDNICRRMIITILDCLLPAIYHIINFSL 351
           R PDV P     ++  EI+K    +K   A G D I    I   +   L A   +     
Sbjct: 384 RNPDVEPVS---ISADEIQKAADHLKLGKAPGPDGIPIEAIKAAIKAYLEAFLSVFQNCF 440

Query: 350 DSGEFPFLWRRAYVRALPKI-PDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFNNSL 174
           D+G FP  W+R  +  LPK    P   +  RP++++   +K+LEI +  +L  +      
Sbjct: 441 DTGFFPIPWKRQKLVLLPKPGKPPDDASALRPLALIDNFAKILEILILNRLVVYTEGEHG 500

Query: 173 ISPFQSGFRPGHSTISALLKVTGDIRVGLEE----SKITILVLVDFSNAFNT 30
           +S  Q GFR G ST  A+  V    R  L +    ++   +V +D  NAFN+
Sbjct: 501 LSDRQFGFRKGRSTGEAIAAVLKKRRSALLKKRTGNRYCAIVTIDVKNAFNS 552


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 64.9 bits (151), Expect = 2e-12
 Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 12/172 (6%)
 Frame = -2

Query: 509 PFQLFPVAPSEIRKVILSIKSN-AVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFP 333
           P+ + PV   E+ ++   + S  A G D I    + T +         I     D GEFP
Sbjct: 427 PYHIRPVTDLELERIADDMCSRKAPGLDGIPNIALKTAIKKHTAVFRSIYQGCFDRGEFP 486

Query: 332 FLWR--RAYVRALPKIPDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFN--NSLISP 165
             W+  R  +   P  P P   + FRP+ +L  L KVLE  +  +L+ F+ N   S +SP
Sbjct: 487 AHWKIQRLVLLQKPGKP-PGESSSFRPLGMLNGLGKVLERLILNRLNEFLENGETSHLSP 545

Query: 164 FQSGFRPGHSTISALLKVT-------GDIRVGLEESKITILVLVDFSNAFNT 30
            Q GFR G ST+  +L+V           R    + +  ++V +D  NAFNT
Sbjct: 546 NQYGFRRGKSTVQGILRVVQAGRTAKSFNRTNGRDMRCLMVVSLDVRNAFNT 597


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 61.3 bits (142), Expect = 3e-11
 Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
 Frame = -2

Query: 491 VAPSEIRKVILS-IKSNAVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFPFLWRRA 315
           V P E+  +    +   A G D I    +   ++        +    L  G FP  W+R 
Sbjct: 488 VEPQELLSIAAGMVTRKAPGLDGIPNAAVKVAIEEYTEEFCRLYQDCLSRGTFPPQWKRQ 547

Query: 314 YVRALPKI-PDPSVPNHFRPISILPFLSKVLEICVHKQLSRFI--FNNSLISPFQSGFRP 144
            +  LPK    P   + +RP+ +L  L KVLE  +  +L+R I   ++  +S  Q GFR 
Sbjct: 548 RLVLLPKPGKPPGESSSYRPLCMLDALGKVLERLILNRLNRHIEQQDSPQLSDAQYGFRR 607

Query: 143 GHSTISALLKV--TGDI-----RVGLEESKITILVLVDFSNAFNT 30
           G STISA+ +V   G       R    + +  ++V +D  NAFNT
Sbjct: 608 GRSTISAIQRVVDAGTAAKLFRRTNTRDKRCLMVVALDIRNAFNT 652


>AJ970245-1|CAI96717.1|  134|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 134

 Score = 60.9 bits (141), Expect = 4e-11
 Identities = 34/87 (39%), Positives = 49/87 (56%)
 Frame = -2

Query: 266 FRPISILPFLSKVLEICVHKQLSRFIFNNSLISPFQSGFRPGHSTISALLKVTGDIRVGL 87
           +RPIS+L  L K+ E  +  +++   FNN++I   Q GFRP  ST   L +VT +I    
Sbjct: 2   YRPISLLSCLGKIFEKLLESRMALHTFNNNIIPKSQFGFRPSLSTTHQLHRVTNNIVHNR 61

Query: 86  EESKITILVLVDFSNAFNTVCHDILLS 6
              K T L L+D   AF+++ H  LLS
Sbjct: 62  CNRKSTGLALLDTEKAFDSIWHQGLLS 88


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 59.7 bits (138), Expect = 8e-11
 Identities = 42/161 (26%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
 Frame = -2

Query: 494 PVAPSEIRKVILSIK-SNAVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFPFLWRR 318
           P+   EI  +   +K   A G D I    I   +        +++  +L +G+FP +W+ 
Sbjct: 453 PITRQEIINLANRLKCGKAPGIDGIPNMAIKAAMLAYPDVFKNVLMNTLTTGQFPSMWKI 512

Query: 317 AYVRALPKI-PDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFNNSLISPFQSGFRPG 141
             +  +PK    P  P+ FRP+ ++  L+KV E+ +  +L+++      +S  Q GFR  
Sbjct: 513 QKLVLIPKPGKPPGHPSAFRPLGLVDNLAKVQEMVILDRLTKYTEGPHGLSDRQFGFRKK 572

Query: 140 HSTISALLKVTGDIRVGLEE----SKITILVLVDFSNAFNT 30
            ST+ A+L V        +     ++   L+ +D  NAFN+
Sbjct: 573 RSTVDAILAVLEKGIAAFQRKRCGARYCALITIDVKNAFNS 613


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 57.6 bits (133), Expect = 3e-10
 Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 11/166 (6%)
 Frame = -2

Query: 494 PVAPSEIRKVILSIKSN-AVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFPFLWRR 318
           PV   E+  +   + ++ A G D I    + T +     +   +    L+   FP  W+R
Sbjct: 472 PVTDDELLLIASQMANHKAPGLDGIPNAAVKTAIMLFPESSGFLYQDCLNRASFPAQWKR 531

Query: 317 AYVRALPKI-PDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFNNSL--ISPFQSGFR 147
             +  LPK    P   + +RP+ +L  L KVLE  +  +L+  +   S   +S  Q GFR
Sbjct: 532 QRLVLLPKQGKPPGESSSYRPLCMLDALGKVLERLILNRLNEHLEEPSSPRLSDRQFGFR 591

Query: 146 PGHSTISALLKVTGDIRVGL-------EESKITILVLVDFSNAFNT 30
            G ST+SA+ +V    R  +        +++  ++V +D  NAFNT
Sbjct: 592 RGRSTVSAIQRVVEAGRTAMSFRRTNGRDNRFLLVVALDVKNAFNT 637


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 55.2 bits (127), Expect = 2e-09
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 11/165 (6%)
 Frame = -2

Query: 491 VAPSEIRKVILSIKSN-AVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFPFLWRRA 315
           V P E++ +   + +  A G D I    +   +         +    L  G FP  W+R 
Sbjct: 427 VTPRELQDIAHQMATRKAPGLDGIPNAAVKAAIGMYPDVFCRMYQDCLTRGTFPSEWKRQ 486

Query: 314 YVRALPKI-PDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIF--NNSLISPFQSGFRP 144
            +  L K    P   + +RP+S+L  L KVLE  +  +L++ +   ++  +S  Q GFR 
Sbjct: 487 RLVLLSKTGKPPGESSSYRPLSMLDALGKVLEQLILNRLNKHLEDPDSPRLSDAQYGFRR 546

Query: 143 GHSTISALLKVT-------GDIRVGLEESKITILVLVDFSNAFNT 30
           G ST SA+ +V           R    + +  ++V +D  NAFNT
Sbjct: 547 GRSTFSAIQRVVDAGRRAKSFRRTNHRDKRCLMVVALDICNAFNT 591


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 52.8 bits (121), Expect = 9e-09
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 11/161 (6%)
 Frame = -2

Query: 479 EIRKVILSIKSN-AVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFPFLWRRAYVRA 303
           E+R +  ++ +  A G D I    +   +         +    L++  FP  W+R  +  
Sbjct: 484 ELRLIASTMPNKKAPGLDGIPNAAVKAAILAYTDVFQALYQSCLETATFPAPWKRQRLVL 543

Query: 302 LPKIPDPSVPN-HFRPISILPFLSKVLEICVHKQLSRFIFNNSLI--SPFQSGFRPGHST 132
           LPK   P   N  +RP+ +L  L KVLE  +  +L   + + + +  S  Q GFR G ST
Sbjct: 544 LPKPGKPPGSNGSYRPLCMLDALGKVLEKLILNRLHNHLEDPAAVRLSDRQHGFRRGRST 603

Query: 131 ISALLKV--TGDI-----RVGLEESKITILVLVDFSNAFNT 30
           I A+  V   G       R    +++  ++V +D  NAFNT
Sbjct: 604 IGAIRTVIEAGQSAMRFRRTNGRDNRFLLVVSMDVKNAFNT 644


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 52.4 bits (120), Expect = 1e-08
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
 Frame = -2

Query: 491 VAPSEIRKVILSIK-SNAVGYDNICRRMIITILDCLLPAIYHIINFSLDSGEFPFLWRRA 315
           V P E++++   +    A G D I    +   ++        +    L++G FP  W+R 
Sbjct: 435 VTPEELQEIAAHMAIRKAPGLDGIPNAAVKVAIEKYPGVFCRVYQDCLNTGTFPQQWKRQ 494

Query: 314 YVRALPKIPD-PSVPNHFRPISILPFLSKVLEICVHKQLSRFIFN--NSLISPFQSGFRP 144
            +  LPK    P   + +RP+ +L  L KVLE  +   L+R + +  +  +S  Q GFR 
Sbjct: 495 RLVLLPKPGKAPGESSSYRPLCMLDALGKVLERLI---LNRHLEDPDSPQLSDAQYGFRR 551

Query: 143 GHSTISAL--LKVTGDI-----RVGLEESKITILVLVDFSNAFNT 30
           G STISA+  L   G       +    + +  ++V +D  NAFNT
Sbjct: 552 GRSTISAIQSLVDAGKASRSFGQTNNRDKRCLMVVALDVRNAFNT 596


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1099

 Score = 52.0 bits (119), Expect = 2e-08
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
 Frame = -2

Query: 353 LDSGEFPFLWRRAYVRALPKIPDPS-VPNHFRPISILPFLSKVLEICVHKQLSRFIFN-- 183
           L +G FP  W+R  +  +PK   PS V   +RP+ +L  L KVLE  +  +L  F+ +  
Sbjct: 460 LVNGTFPAAWKRQRLVLIPKPGKPSGVSCSYRPLCMLDALGKVLERLILNRLHEFLEDPE 519

Query: 182 NSLISPFQSGFRPGHSTISALLKV--TGDI-----RVGLEESKITILVLVDFSNAFNT 30
           +  +S  Q GFR G STI  + +V   G       R    + +  ++  +D  NAFNT
Sbjct: 520 SPRLSDRQYGFRRGCSTIGLIQRVVEAGQRAMSFGRANRRDKRFLLVAALDVRNAFNT 577


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 51.6 bits (118), Expect = 2e-08
 Identities = 34/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = -2

Query: 353 LDSGEFPFLWRRAYVRALPKI-PDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFNNS 177
           L++ +FP  W+R  +  +PK    P  P   RPI +L    K LE  + ++L+  I   +
Sbjct: 444 LENAKFPDEWKRQRLVLIPKPNKPPGEPGSVRPICLLDGAGKGLERIIVQRLNAHIEEVN 503

Query: 176 LISPFQSGFRPGHSTISALLKVTGDIRVGLEESKIT----ILVLVDFSNAFNT 30
            +S  Q GFR   ST+ A+ +V   + V    ++ +     +V +D +NAFN+
Sbjct: 504 GLSDDQFGFRSRRSTVDAIQRVVDIVSVARSRNRYSGRYCAVVTLDVTNAFNS 556


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 51.2 bits (117), Expect = 3e-08
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
 Frame = -2

Query: 491 VAPSEIRKVILSIKSNAV-GYDNICRRMIITILDCLLPAIYH-IINFSLDSGEFPFLWRR 318
           V   EIR +  S+KS  V G D I    + T +    P I+  +    LD+G FP  W++
Sbjct: 401 VTDEEIRNIGRSLKSRKVPGPDGIPNAALATAM-IEEPTIFKKVYQRCLDTGVFPDNWKK 459

Query: 317 A-YVRALPKIPD-PSVPNHFRPISILPFLSKVLEICVHKQLSRFIFNNSLISPFQSGFRP 144
              V ++PK    P      RPI ++  ++K LE  +  +L+  I     +S  Q GFR 
Sbjct: 460 QRLVLSIPKPGKRPGESGSSRPICLIDGVAKGLERVILHRLNNHIERVQGLSENQYGFRK 519

Query: 143 GHSTISALLKVTGDIRVGLEE----SKITILVLVDFSNAFNT 30
           G +T  A+ KV              ++   +V +D  NAFN+
Sbjct: 520 GRATTDAIEKVLSIASASRARNRGANRFCAVVTLDVKNAFNS 561


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 44.0 bits (99), Expect = 4e-06
 Identities = 35/118 (29%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
 Frame = -2

Query: 353 LDSGEFPFLWRRAYVRALPKI-PDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFN-- 183
           LD+  FP  W++  +  +PK    P + + FRPI +L    KV E  +  +++  I +  
Sbjct: 466 LDNERFPDEWKKQKLALIPKPGKPPGLASSFRPILLLNNPGKVYERLLLSRINDVIEDPE 525

Query: 182 NSLISPFQSGFRPGHSTISALLKV--TGDI-----RVGLEESKITILVLVDFSNAFNT 30
           +  ++  Q GFR G ST+ A+  V   G       R    + +  ++V +D  NAFNT
Sbjct: 526 SPRLAENQYGFRRGRSTVQAIQLVVDAGSHAMSFGRTNNRDKRCLLVVALDVRNAFNT 583


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
 Frame = -2

Query: 350 DSGEFPFLWRRAYVRALPKIPDPSVPNHFRPISILPFLSKVLEICVHKQLSRFIFNNSLI 171
           DS + P          LPK  +   P  +RP++ L  L+KVL   + +++      N+++
Sbjct: 506 DSRKLPKFITGGVTYFLPKDQNTKNPAKYRPLTCLSNLNKVLSSVITQKVKDHCDTNNVM 565

Query: 170 SPFQSGFRPGHSTISALLKVTGDIRVG--LEESKITILVLVDFSNAFNTVCHDILLSI 3
           +  Q+G R         + +   I VG   ++ +   +  +D+  A+++V H  LL +
Sbjct: 566 TEEQTGRRKNTQGCKDQVIIDAVI-VGQAAKKQRNLDMAYIDYKKAYDSVPHSYLLKV 622


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 284 PSVPNHFRPISILPFLSKVLEICVH 210
           P +P  ++   IL  LSK+++ C H
Sbjct: 513 PPIPQRWQDEDILVVLSKIMQECWH 537


>AY324311-1|AAQ89696.1|  158|Anopheles gambiae insulin-like peptide
           5 precursor protein.
          Length = 158

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +1

Query: 376 IAGRRQSRIVIIMRRHMLSYPTALDLMESITFLISEGATGKS*KG 510
           IAG  + R  ++    ++ YP A+D   +  FL +   TGK   G
Sbjct: 80  IAGMMEKRTSMVDEGQLVPYPWAIDREVAYAFLRTR-RTGKRRSG 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,483
Number of Sequences: 2352
Number of extensions: 13271
Number of successful extensions: 51
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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