Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0537
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   4.9  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   8.5  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 429  MIRDEDSGFAIGHGSKRVNKMLVGQSMGEEKGKLSELLVAR 551
            ++RD DS   I  G+KR+   L  ++  EE+  L+  ++ R
Sbjct: 1049 LLRDADSWSRICEGAKRITAQL-QRAWDEERAALAVNVIER 1088


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 279 KDRFQVHEVQYGHRRRQRPLHCAAQPVPG 193
           + R  +H+ +    RR+RP      P PG
Sbjct: 286 QQRMGIHQQEKRRPRRKRPDEIVVVPAPG 314


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,722
Number of Sequences: 2352
Number of extensions: 13655
Number of successful extensions: 18
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)