Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0529
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37965| Best HMM Match : TIR (HMM E-Value=3.3) 259 1e-69
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 113 9e-26
SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.) 101 5e-22
SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 8e-20
SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 76 2e-14
SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05) 75 5e-14
SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4) 70 2e-12
SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15) 58 9e-09
SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_45479| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_52581| Best HMM Match : Synuclein (HMM E-Value=3.7) 30 1.5
SB_20828| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 29 2.6
SB_4186| Best HMM Match : ADK (HMM E-Value=0.094) 29 3.4
SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_4107| Best HMM Match : M (HMM E-Value=8e-22) 29 4.5
SB_53227| Best HMM Match : rve (HMM E-Value=1.6e-18) 28 6.0
SB_37648| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_22241| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 28 6.0
SB_8698| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_31093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
SB_7582| Best HMM Match : 5-nucleotidase (HMM E-Value=0) 28 7.9
>SB_37965| Best HMM Match : TIR (HMM E-Value=3.3)
Length = 189
Score = 259 bits (635), Expect = 1e-69
Identities = 128/169 (75%), Positives = 145/169 (85%)
Frame = +2
Query: 167 ARTAASLILRGPTDAYCDEMERSAHDALCAVRRVLESGKLVPGGGAVEAALSIYLENFAT 346
AR+++S+ILRG D DEMERS HDA+C V+RVLES LVPGGGAVEAALSIYLENFAT
Sbjct: 4 ARSSSSIILRGANDYMLDEMERSMHDAICVVKRVLESKTLVPGGGAVEAALSIYLENFAT 63
Query: 347 TLSSREQLAIAAFAQSLLVIPKTLAVNAARDATDLVAKLRAYHNSSQTKVEHANLKWVGL 526
+L SREQLAIA FA SLLVIPK L+VNAA+D+ DLVAKLRA+HN+SQ E ++LKW+GL
Sbjct: 64 SLGSREQLAIAEFANSLLVIPKILSVNAAKDSADLVAKLRAFHNTSQINAERSHLKWIGL 123
Query: 527 DLTEGTLRDNLAAGVLEPAISKIKSLKFATEAAITILRIDDMIKLDPEQ 673
DL EGT+RDN AGV EPAI KIKSLKFATEAAITILRIDDMIKL PE+
Sbjct: 124 DLVEGTVRDNKKAGVFEPAICKIKSLKFATEAAITILRIDDMIKLTPEK 172
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 113 bits (273), Expect = 9e-26
Identities = 67/193 (34%), Positives = 101/193 (52%)
Frame = +2
Query: 95 IGEAAEVIQEQICDDQLILIKGPAARTAASLILRGPTDAYCDEMERSAHDALCAVRRVLE 274
+G ++ + I +D+LI G A A ++++RG T DE ERS HDALC + + +
Sbjct: 340 LGTCKKIEEVMIGEDKLIHFSGCALNEACTVVIRGATQQILDEAERSLHDALCVLNQTGK 399
Query: 275 SGKLVPGGGAVEAALSIYLENFATTLSSREQLAIAAFAQSLLVIPKTLAVNAARDATDLV 454
K V GGGA E ++ + A +E A+ +FA +L +P +A NA D+ DLV
Sbjct: 400 ENKTVNGGGASEVLMAHAVSQLAAKTPGKEAAAMESFATALRQLPTIIADNAGYDSADLV 459
Query: 455 AKLRAYHNSSQTKVEHANLKWVGLDLTEGTLRDNLAAGVLEPAISKIKSLKFATEAAITI 634
AKLRA H + GL++ GT+ D G+ E K + L A EAA I
Sbjct: 460 AKLRAAHTQGKNT--------YGLNMVNGTVGDMRDLGITESYQVKRQVLLSAAEAAEMI 511
Query: 635 LRIDDMIKLDPEQ 673
+R+D+++K P Q
Sbjct: 512 VRVDNIVKAAPRQ 524
>SB_53295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 101 bits (242), Expect = 5e-22
Identities = 57/193 (29%), Positives = 105/193 (54%), Gaps = 1/193 (0%)
Frame = +2
Query: 80 FEANMIGEAAEVIQEQICDDQLILIKGPA-ARTAASLILRGPTDAYCDEMERSAHDALCA 256
F +M+ A V + + +++ I G + S+++RG +E +RS HDALC
Sbjct: 32 FNPDMLASAELVEEVSVGTSKVVKITGVSNPGNTVSVLVRGSNKLVLEEADRSLHDALCV 91
Query: 257 VRRVLESGKLVPGGGAVEAALSIYLENFATTLSSREQLAIAAFAQSLLVIPKTLAVNAAR 436
+R +++ L+ GGGA E +++ L ++ TL+S + + AFA++L +IP TLA NA
Sbjct: 92 IRCLVKKRALIAGGGAPEIEVALRLAEYSQTLTSMDAYCVRAFAEALEIIPYTLAENAGL 151
Query: 437 DATDLVAKLRAYHNSSQTKVEHANLKWVGLDLTEGTLRDNLAAGVLEPAISKIKSLKFAT 616
+ V +LR H + G+++ +GT+ + L VL+P + +++ A+
Sbjct: 152 NPIATVTELRNRHAQGEVT--------AGINVRKGTVTNILEENVLQPLLVSTSAVQLAS 203
Query: 617 EAAITILRIDDMI 655
E +IL+IDD++
Sbjct: 204 ETVRSILKIDDIV 216
>SB_5310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 94.3 bits (224), Expect = 8e-20
Identities = 43/101 (42%), Positives = 68/101 (67%)
Frame = +2
Query: 173 TAASLILRGPTDAYCDEMERSAHDALCAVRRVLESGKLVPGGGAVEAALSIYLENFATTL 352
T ++I+RG + + +E ERS HDA+ VRR +++ +V GGGA+E LS YL +++ T+
Sbjct: 12 TTCTIIMRGGAEQFMEETERSLHDAIMIVRRAMKNDAVVAGGGAIEMELSKYLRDYSRTI 71
Query: 353 SSREQLAIAAFAQSLLVIPKTLAVNAARDATDLVAKLRAYH 475
+ +EQL I A A++ +IP+ L NA DAT+++ KLR H
Sbjct: 72 AGKEQLLIGAMAKAFEIIPRQLCDNAGFDATNILNKLRQKH 112
>SB_25100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 546
Score = 77.4 bits (182), Expect = 1e-14
Identities = 69/236 (29%), Positives = 108/236 (45%), Gaps = 23/236 (9%)
Frame = +2
Query: 8 SKKIAKATGATFLTSLTNMDGEEV------FEANMIGEAAEVIQEQICDDQLILIKGPAA 169
+ +IA+A GAT + + E++ FE N G+ + +++ + LILIK
Sbjct: 82 NNRIARACGATIVNRTEELKEEDIGTGAGLFEVNKFGDET-IKLDKLNYNLLILIKEAIQ 140
Query: 170 RT-----------------AASLILRGPTDAYCDEMERSAHDALCAVRRVLESGKLVPGG 298
RT A +++LRG + +E+ER+ DA+ R V+ +LVPGG
Sbjct: 141 RTSYYHRYFTFITECKNPKACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPGG 200
Query: 299 GAVEAALSIYLENFATTLSSREQLAIAAFAQSLLVIPKTLAVNAARDATDLVAKLRAYHN 478
GA E AL+ L A ++ +Q A A+ L VIP+TL N + + LRA H
Sbjct: 201 GACEMALAHALTEKAKLVAGVQQWPYKAVAKGLEVIPRTLIQNCGANTIRTITALRAKH- 259
Query: 479 SSQTKVEHANLKWVGLDLTEGTLRDNLAAGVLEPAISKIKSLKFATEAAITILRID 646
N W G+D G + D GV + K ++ K A E ++L +D
Sbjct: 260 -----AAEGNTSW-GIDGESGQIVDMQELGVWDTYAVKAQTFKTALEKK-SLLDVD 308
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 76.2 bits (179), Expect = 2e-14
Identities = 46/151 (30%), Positives = 80/151 (52%)
Frame = +2
Query: 17 IAKATGATFLTSLTNMDGEEVFEANMIGEAAEVIQEQICDDQLILIKGPAARTAASLILR 196
IA ATG + + + E++ +A ++ E + D++++I+ A ++ +R
Sbjct: 331 IAIATGGRIVPRFSELTSEKLGKAGIVRE----LSFGTTKDKMLVIEECHNSRAVTIFIR 386
Query: 197 GPTDAYCDEMERSAHDALCAVRRVLESGKLVPGGGAVEAALSIYLENFATTLSSREQLAI 376
G E +RS HDALC VR ++ ++V GGGA E + SI + A +S+ EQ A+
Sbjct: 387 GGNKMIVGEAKRSIHDALCVVRNLVRDSRVVYGGGATELSCSIAIAKEADKISTIEQYAM 446
Query: 377 AAFAQSLLVIPKTLAVNAARDATDLVAKLRA 469
A+A +L IP LA N+ + VA +++
Sbjct: 447 RAYADALDNIPLALAENSGLNPIQTVADIKS 477
>SB_49103| Best HMM Match : Cpn60_TCP1 (HMM E-Value=2.5e-05)
Length = 206
Score = 74.9 bits (176), Expect = 5e-14
Identities = 45/151 (29%), Positives = 80/151 (52%)
Frame = +2
Query: 17 IAKATGATFLTSLTNMDGEEVFEANMIGEAAEVIQEQICDDQLILIKGPAARTAASLILR 196
IA ATG + + + E++ +A ++ E + D++++I+ A ++ +R
Sbjct: 46 IAIATGGRIVPRFSELTSEKLGKAGIVRE----LSFGTTKDKMLVIEECHNSRAVTIFIR 101
Query: 197 GPTDAYCDEMERSAHDALCAVRRVLESGKLVPGGGAVEAALSIYLENFATTLSSREQLAI 376
G E +RS HDALC VR ++ ++V GGGA E + SI + A +++ EQ A+
Sbjct: 102 GGNKMIVGEAKRSIHDALCVVRNLVRDSRVVYGGGATELSCSIAIAKEADKIATIEQYAM 161
Query: 377 AAFAQSLLVIPKTLAVNAARDATDLVAKLRA 469
A+A +L IP LA N+ + VA +++
Sbjct: 162 RAYADALDNIPLALAENSGLNPIQTVADIKS 192
>SB_30391| Best HMM Match : SpoVG (HMM E-Value=6.4)
Length = 101
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/52 (57%), Positives = 44/52 (84%)
Frame = +2
Query: 2 GRSKKIAKATGATFLTSLTNMDGEEVFEANMIGEAAEVIQEQICDDQLILIK 157
G K+IA++TGAT + SL N++GEE F+A+M+G+A EV Q++ICDD+LI+IK
Sbjct: 49 GDLKRIARSTGATMVLSLANLEGEESFDASMLGQAEEVCQQRICDDELIVIK 100
>SB_17755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 317
Score = 64.1 bits (149), Expect = 1e-10
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Frame = +2
Query: 8 SKKIAKATGATFLTSLTNMDGEEV------FEANMIGEAAEVIQEQICDDQLILIKGPAA 169
+ +IA+A GAT + + E++ FE N G+ + + +++ + LILIK
Sbjct: 139 NNRIARACGATIVNRTEELKEEDIGTGAGLFEVNKFGDES-IKLDKLNYNLLILIKEAIQ 197
Query: 170 RT-----------------AASLILRGPTDAYCDEMERSAHDALCAVRRVLESGKLVPGG 298
T A +++LRG + +E+ER+ DA+ R V+ +LVPGG
Sbjct: 198 MTSYYRRYFTFITECNNPKACTILLRGASKDVLNEVERNLQDAMNVARNVIVDPRLVPGG 257
Query: 299 GAVEAALSIYLENFATTLSSREQLAIAAFAQSLLVIPKTLAVNAARDATDLVAKLR 466
GA E AL+ L A ++ +Q A A+ L VIP+TL N + + LR
Sbjct: 258 GACEMALAHALTEKAKLVAGVQQWPYKAVAKGLEVIPRTLIQNCGANTIRTITALR 313
>SB_56262| Best HMM Match : Cpn60_TCP1 (HMM E-Value=6.6e-15)
Length = 563
Score = 57.6 bits (133), Expect = 9e-09
Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Frame = +2
Query: 149 LIKGPAARTAASLILRGPTDAYCDEMERSAHDALCAVRRVLESGK----LVPGGGAVEAA 316
L+ G + +A ++L GP + C + + DAL A++ + + L+PG G VE A
Sbjct: 377 LVLGVSEVSAHQIMLCGPAEGLCRQYYLALLDALKAIKMTFSTDRRALLLLPGCGLVEVA 436
Query: 317 LSIYLENFATTLSSRE-QLAIAAFAQSLLVIPKTLAVNAARDATDLVAKLRAYHNSSQTK 493
L+ L++ + +++ E LA +SLL IP+TL N+ L L +T
Sbjct: 437 LASDLQHLSKMITNTELALACQILGKSLLQIPRTLYQNSFAGKQGLQQFLTQL-QIMETS 495
Query: 494 VEHANLKWVGLDLTEGTLRDNLAAGVLEPAISKIKSLKFATEAAITILRIDDMI 655
++NL G+D G + +LEP ++K +L + +LRI+ ++
Sbjct: 496 WRNSNLS-EGIDGRTGLPINPFVHEILEPLLAKKDTLHCVFQCVTQVLRINQVL 548
>SB_36771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 50.4 bits (115), Expect = 1e-06
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = +2
Query: 404 IPKTLAVNAARDATDLVAKLRAYHNSSQTKVEHANLKWVGLDLTEGTLRDNLAAGVLEPA 583
+P +A NA D+ DLVAKLRA H + GL++ GT+ D G+ E
Sbjct: 1 LPTIIADNAGYDSADLVAKLRAAHTQGKNTY--------GLNMVNGTVGDMRDLGITESY 52
Query: 584 ISKIKSLKFATEAAITILRIDDMIKLDP 667
K + L A EAA I+R+D+++K P
Sbjct: 53 QVKRQVLLSAAEAAEMIVRVDNIVKAAP 80
>SB_45479| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 55
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +2
Query: 347 TLSSREQLAIAAFAQSLLVIPKTLAVNAARDATDLVAKLRAYHNSSQ 487
T + EQ AIA FA+SL +P+ LA NA AT+L++KL A H +
Sbjct: 1 TFAGLEQYAIAKFAESLECVPRALADNAGVKATELISKLYAAHQEGK 47
>SB_56828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Frame = +2
Query: 11 KKIAKATGATFLTSLTNMDGEEVFEANMIGEAAEVIQEQICDDQLILIKGPAARTA-ASL 187
+++ +A AT L +T E+ +G V +I + + + K TA A++
Sbjct: 176 RRLCRAISATALPKVTTPTTED------LGHCDLVYLSEIGETPVTIFKQEREETAVATV 229
Query: 188 ILRGPTDAYCDEMERSAHDALCAVRRVLESGKLVPGGGAVEAALSIYLENFATTLSSREQ 367
++RG T+ D++ER+ D + + + + + VPG GA E L+ L + A S+ +
Sbjct: 230 VIRGSTENIMDDIERAIDDGVNSFKALTRDPRFVPGAGASEIELARKLTSHAECGSADIK 289
Query: 368 LAIAA 382
A+ A
Sbjct: 290 DAVEA 294
Score = 37.1 bits (82), Expect = 0.013
Identities = 15/34 (44%), Positives = 26/34 (76%)
Frame = +2
Query: 545 LRDNLAAGVLEPAISKIKSLKFATEAAITILRID 646
++D + AG+L+ ++K LK AT+AA+T+LR+D
Sbjct: 288 IKDAVEAGILDVYLTKHWGLKLATDAAVTVLRVD 321
>SB_3960| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 762
Score = 37.1 bits (82), Expect = 0.013
Identities = 26/64 (40%), Positives = 33/64 (51%)
Frame = +2
Query: 380 AFAQSLLVIPKTLAVNAARDATDLVAKLRAYHNSSQTKVEHANLKWVGLDLTEGTLRDNL 559
AFA +LLVIPKTLA N+ D + + KL + S T VG+DL+ G
Sbjct: 361 AFADALLVIPKTLAQNSGFDPQETMVKLLEEYADSNTP--------VGVDLSSGEAMIPA 412
Query: 560 AAGV 571
AGV
Sbjct: 413 DAGV 416
>SB_26565| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 32.3 bits (70), Expect = 0.37
Identities = 29/119 (24%), Positives = 55/119 (46%)
Frame = +2
Query: 17 IAKATGATFLTSLTNMDGEEVFEANMIGEAAEVIQEQICDDQLILIKGPAARTAASLILR 196
+ + TGAT L++ T D E + + VI + L LI + ++IL
Sbjct: 44 VQRLTGATLLSTFTT-DIPEHWYGQLDSIEYTVIANK---SYLHLIPTQPMTSVCTVILC 99
Query: 197 GPTDAYCDEMERSAHDALCAVRRVLESGKLVPGGGAVEAALSIYLENFATTLSSREQLA 373
P ++ +E+ + A+ + +V+ +VPG G ++ L+ +L A L +E+ A
Sbjct: 100 SPDESSLEELLSTCQSAMSVLAQVVAYPWVVPGAGCMDTHLAGFLRTKA--LREKEEAA 156
>SB_52581| Best HMM Match : Synuclein (HMM E-Value=3.7)
Length = 198
Score = 30.3 bits (65), Expect = 1.5
Identities = 32/96 (33%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Frame = -2
Query: 433 RRVNR--QRLRDHEERLRKRCNSQLLAGAEGSCKVLQVDGECRFDRAAAGHELAGLQHAA 260
R V+R +R + H +R +RC ++ GAE CK G R R +H
Sbjct: 35 RHVDRGAERCKRHVDRGAERCKRHVVRGAE-QCKRHVDRGAERCKRHVDRGAERCKRHVD 93
Query: 259 HGAQRVVRGPLHLVAVRVRGTAQDKR---RGRARCR 161
GA+R R H+ VRG Q KR RG RC+
Sbjct: 94 RGAERCKR---HV----VRGAEQCKRHVDRGAERCK 122
>SB_20828| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 354
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = -3
Query: 369 NCSRELRVVAKFSK*MESAASTAPPPGTSLPDSSTRRTAHSASCADRSISSQYASVGPRR 190
+CS + RV+ F + A P T +P SST + S+S S S QY + R
Sbjct: 28 SCSEQYRVILVFRAVLNHTCVRAVPSHTRVP-SSTESHSCSSSTESHSCSEQYRVILVFR 86
Query: 189 --ISDAAVRAAGPLIKIS*SSQICSWITSAAS 100
++ VRA ++ S++ S +S S
Sbjct: 87 AVLNHTCVRAVPSHTRVPSSAESHSCSSSTES 118
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = -3
Query: 306 TAPPPGTSLPDSSTRRTAHSASCADRSISSQYASVGPRRISDAAVRAAGPLIKIS*SSQI 127
T+P P TSLP SST ++S A+ + AS G + I +S I
Sbjct: 505 TSPAPSTSLPASSTLPVLPTSSLAETPSTQSVASSGVMVTFSSVATVNSSTISADITSII 564
Query: 126 CSWITSAASPIILAS 82
S + +S +L++
Sbjct: 565 SSSSLNISSAYVLST 579
>SB_4186| Best HMM Match : ADK (HMM E-Value=0.094)
Length = 1053
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 404 IPKTLAVNAARDATDLVAKLRAYHNSSQTKVEHANLKWV 520
+P L AARD TDL+ A + + + NL WV
Sbjct: 700 LPSKLKSEAARDGTDLIKGTHALAKAVTSDSKSFNLSWV 738
>SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 329 LENFATTLSSREQLAIAAFAQSLLVIPKTLAVNAARDATDLVAKLRAYHNSSQTKV 496
L+N T + LAI + +V+ + ARDAT LV + + SSQ+ V
Sbjct: 250 LKNPHTAVPKGTLLAILVSSLVYIVLAWLIGATYARDATGLVMSVAVVNGSSQSNV 305
>SB_4107| Best HMM Match : M (HMM E-Value=8e-22)
Length = 2039
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +1
Query: 487 NQGGTRKPQMGRSGSNRRNTPGQPRSRSPRAS 582
N G + P RS S RR G+ RSRSP S
Sbjct: 1369 NSGRSPSPSRTRSPSPRRRMFGRSRSRSPEKS 1400
>SB_53227| Best HMM Match : rve (HMM E-Value=1.6e-18)
Length = 305
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 484 TNQGGTRKPQMGRSGSNRRNTPGQPRSRSPRASD 585
+ + R P GR+G R G+P + P ASD
Sbjct: 243 SRKASPRGPPRGRNGGVHRRKRGRPSGQGPTASD 276
>SB_37648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 351
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = -2
Query: 376 NSQLLAGAEGSCKVLQVDGE--CRFDRAAAGHELAGLQHAAHGAQRVVRGPLHL 221
N ++LA A CK +QVD RF AA H + L G V +H+
Sbjct: 175 NQEILALAAAGCKYIQVDAPVLVRFPDAALHHGIEHLSKCFSGVPDDVTRCIHI 228
>SB_22241| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 395 LLVIPKTLAVNAARDATDLVAKLRAYHNSSQTKVEHANLKWVGLD 529
LL+IP+ +A +R+ + ++ ++ + KV ANL V D
Sbjct: 491 LLIIPRMMAAKVSRNRNNATLQMHCSAHTVKVKVSGANLSRVSSD 535
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 463 TSLPQLITNQGGTRKPQMGRSGSNRRNTPGQPR--SRSPRASDIQDQ 597
TS PQ + +RKPQ ++ S + + P PR SR + S +QDQ
Sbjct: 230 TSKPQ--APRQASRKPQDKQAASPKTSKPQAPRQASRKTKTSKLQDQ 274
>SB_8698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 484 TNQGGTRKPQMGRSGSNRRNTPGQPRSRSPRASD 585
+ + R P GR+G R G+P + P ASD
Sbjct: 102 SRKASPRGPPRGRNGGVHRRKRGRPSGQGPTASD 135
>SB_31093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = -2
Query: 388 RKRCNSQLLAGAEGSCKVLQVDGECRFDRAAA 293
RKR SQ AG+ +C VL + C + A+
Sbjct: 54 RKRSESQRAAGSADTCMVLSIASTCTLEDVAS 85
>SB_7582| Best HMM Match : 5-nucleotidase (HMM E-Value=0)
Length = 441
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = -3
Query: 318 SAASTAPPPGTSLPDSSTRRTAHSASCADRSISSQYASVGPRRISDAAVRAAGPLIKI 145
S A + P ++L ++S C +RSISS S PR+ ++ ++ P++ I
Sbjct: 40 SKACRSIVPKSALRENSGSSLIRGMDCVNRSISSSEVSDSPRK-AEELIKTLPPILGI 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,526,920
Number of Sequences: 59808
Number of extensions: 321041
Number of successful extensions: 1257
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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