Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0528
(570 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q175U5 Cluster: Putative uncharacterized protein; n=1; ... 186 4e-46
UniRef50_Q8N9A8 Cluster: Transmembrane protein 188; n=32; Eumeta... 174 1e-42
UniRef50_Q3UJ81-2 Cluster: Isoform 2 of Q3UJ81 ; n=1; Mus muscul... 126 4e-28
UniRef50_Q5DHT8 Cluster: SJCHGC07079 protein; n=1; Schistosoma j... 120 3e-26
UniRef50_Q9XXN3 Cluster: UPF0427 protein T19A6.3; n=3; Caenorhab... 96 4e-19
UniRef50_Q5LJU1 Cluster: CG41106-PA; n=1; Drosophila melanogaste... 78 2e-13
UniRef50_A0HH59 Cluster: Putative uncharacterized protein; n=2; ... 34 2.0
UniRef50_Q8DHC0 Cluster: Tll2039 protein; n=1; Synechococcus elo... 34 2.7
UniRef50_A4CJY0 Cluster: Putative outer membrane protein probabl... 34 2.7
UniRef50_A4B7C5 Cluster: Putative permease; n=1; Alteromonas mac... 33 3.6
UniRef50_A4AGB0 Cluster: Integral membrane protein; n=3; Actinob... 33 4.7
UniRef50_Q7N9K1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.2
UniRef50_Q1AZ18 Cluster: Putative uncharacterized protein precur... 33 6.2
UniRef50_Q4W9E4 Cluster: GABA permease, putative; n=6; Eurotiomy... 33 6.2
UniRef50_Q8DLK7 Cluster: Sensor protein; n=2; Synechococcus elon... 32 8.2
>UniRef50_Q175U5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 145
Score = 186 bits (452), Expect = 4e-46
Identities = 81/129 (62%), Positives = 106/129 (82%)
Frame = +2
Query: 110 MSLEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVS 289
MSLE +AC+DLKAFERRLTEVIA LQP+T+RWRILL +S+ T + A++WL DP T +V
Sbjct: 1 MSLEPSACEDLKAFERRLTEVIAALQPSTLRWRILLCTMSLITFVGAFYWLTDPRTSIVP 60
Query: 290 LTQSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILK 469
L SLWNHP F ++ +L+LLF+ G+H+ V+AP IIT+RTRS+L +FNMSCD+TGKLIL+
Sbjct: 61 LMDSLWNHPVFTFSTAILLLLFVFGIHKLVMAPQIITSRTRSVLAEFNMSCDETGKLILR 120
Query: 470 PRPANSSLF 496
PRP N+S +
Sbjct: 121 PRPTNNSRY 129
>UniRef50_Q8N9A8 Cluster: Transmembrane protein 188; n=32;
Eumetazoa|Rep: Transmembrane protein 188 - Homo sapiens
(Human)
Length = 125
Score = 174 bits (423), Expect = 1e-42
Identities = 81/122 (66%), Positives = 97/122 (79%)
Frame = +2
Query: 113 SLEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSL 292
SLEQ +DLKAFERRLTE I CLQPAT RWR+LL +VSVCTA A++WL+DP T VS
Sbjct: 3 SLEQA--EDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSF 60
Query: 293 TQSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKP 472
SLWNHPFF ++ L+ LF G+H++VVAPSII AR R++L ++NMSCDDTGKLILKP
Sbjct: 61 FTSLWNHPFFTISCITLIGLFFAGIHKRVVAPSIIAARCRTVLAEYNMSCDDTGKLILKP 120
Query: 473 RP 478
RP
Sbjct: 121 RP 122
>UniRef50_Q3UJ81-2 Cluster: Isoform 2 of Q3UJ81 ; n=1; Mus
musculus|Rep: Isoform 2 of Q3UJ81 - Mus musculus (Mouse)
Length = 106
Score = 126 bits (304), Expect = 4e-28
Identities = 59/94 (62%), Positives = 72/94 (76%)
Frame = +2
Query: 113 SLEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSL 292
SLEQ +DLKAFERRLTE I CLQPAT RWR+LL +VSVCTA A++WL+DP T VS
Sbjct: 3 SLEQA--EDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSF 60
Query: 293 TQSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSI 394
SLWNHPFF ++ L+ LF G+H++VVAPS+
Sbjct: 61 FTSLWNHPFFTISCITLIGLFFAGIHKRVVAPSM 94
>UniRef50_Q5DHT8 Cluster: SJCHGC07079 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07079 protein - Schistosoma
japonicum (Blood fluke)
Length = 129
Score = 120 bits (288), Expect = 3e-26
Identities = 55/115 (47%), Positives = 77/115 (66%)
Frame = +2
Query: 134 DDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNH 313
+DLKAFERRL E+I L P +WRI+L++ + +Y WL+DP T SL H
Sbjct: 13 EDLKAFERRLREIINGLGPKAFKWRIVLSVAVLMLFFFSYCWLVDPATYQTGFISSLEKH 72
Query: 314 PFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPRP 478
P F + L++LF++G H+KVV PSII R R IL ++NM+CD++GKLIL+P+P
Sbjct: 73 PEFVFSLLFLMVLFLMGAHKKVVLPSIIAHRCRIILAEYNMACDNSGKLILRPKP 127
>UniRef50_Q9XXN3 Cluster: UPF0427 protein T19A6.3; n=3;
Caenorhabditis|Rep: UPF0427 protein T19A6.3 -
Caenorhabditis elegans
Length = 140
Score = 96.3 bits (229), Expect = 4e-19
Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
Frame = +2
Query: 125 TACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDP---LTPVVSLT 295
TAC+DLK FE+RLTEVI + P RWRI + I +V + + + + + +
Sbjct: 14 TACEDLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANEKIEIFQIPMID 73
Query: 296 QSLWNHPFFAVTSTLLVLLFMI-GVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKP 472
L H F + + +LLF + GVHR++VAP+I+ R R L+ F++SCD GKLI+KP
Sbjct: 74 MFLTTHLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIVKP 133
Query: 473 RPANSS 490
NS+
Sbjct: 134 AVRNSA 139
>UniRef50_Q5LJU1 Cluster: CG41106-PA; n=1; Drosophila
melanogaster|Rep: CG41106-PA - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 77.8 bits (183), Expect = 2e-13
Identities = 41/120 (34%), Positives = 65/120 (54%)
Frame = +2
Query: 116 LEQTACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVVSLT 295
+E T +DL AFERRL EV+ + +++RWR +L + C+AI+A HW+ D +
Sbjct: 1 MEDTDQEDLLAFERRLAEVVNTEKRSSLRWRFVLGAIFACSAISACHWVRDAKESESVVF 60
Query: 296 QSLWNHPFFAVTSTLLVLLFMIGVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKPR 475
Q L + FA + + LL G + I T+ +L+ F ++ D+ G+LIL PR
Sbjct: 61 QILSSQSAFAFSLATICLLIFYGFNHATKQDPSILRDTQEMLSPFRLNIDNQGRLILLPR 120
>UniRef50_A0HH59 Cluster: Putative uncharacterized protein; n=2;
Comamonadaceae|Rep: Putative uncharacterized protein -
Comamonas testosteroni KF-1
Length = 285
Score = 34.3 bits (75), Expect = 2.0
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Frame = +2
Query: 200 RWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHPFFAVTSTLLVLLFMIGVHRKV 379
R R L ++ ++ + A + L V+LT WN PF AV T+L+L FM+G+ V
Sbjct: 116 RKRHLYSVYALPLMLEAVMLIAFGLMGTVTLT---WNTPF-AVPLTVLLLSFMMGLQNAV 171
Query: 380 VA-PSIITARTRSILNDFNMSCDDTGKLILKPRPANSSL 493
+ S + RT + +F + GK+ R AN+ L
Sbjct: 172 GSKTSGGSTRTTHMTGNFTDLGMELGKMFFWKRHANAGL 210
>UniRef50_Q8DHC0 Cluster: Tll2039 protein; n=1; Synechococcus
elongatus|Rep: Tll2039 protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 214
Score = 33.9 bits (74), Expect = 2.7
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 188 PATMR-WRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHPFFAVTSTLLVLLFMIG 364
P T + W LT+ V T +AA LTP+ +L +SLW PF V +TLL L+ G
Sbjct: 140 PGTSKSWEGTLTMFWVSTLVAALS-----LTPIAAL-ESLWIAPFVGVGATLLELIAWRG 193
Query: 365 VHRKVV 382
+ V
Sbjct: 194 MDNLTV 199
>UniRef50_A4CJY0 Cluster: Putative outer membrane protein probably
involved in nutrient binding; n=2; Flavobacteriales|Rep:
Putative outer membrane protein probably involved in
nutrient binding - Robiginitalea biformata HTCC2501
Length = 858
Score = 33.9 bits (74), Expect = 2.7
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = -3
Query: 469 LQNKFASIVTRHVEVIKYGASARCDDARSHYLSMYSNHE 353
L + F +TR VE+IK G+SAR D S +SM+++ E
Sbjct: 276 LISAFNPYLTREVEIIKNGSSARYGDGLSGIISMHTHDE 314
>UniRef50_A4B7C5 Cluster: Putative permease; n=1; Alteromonas
macleodii 'Deep ecotype'|Rep: Putative permease -
Alteromonas macleodii 'Deep ecotype'
Length = 446
Score = 33.5 bits (73), Expect = 3.6
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 209 ILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLW-NHPFFAVTSTLLVLLFM 358
+LLTIVS +IA LM P +S T L+ + P F+ +S ++VLL +
Sbjct: 370 MLLTIVSAALSIALVAVLMSMFKPWLSSTYGLFLSSPLFSQSSVIIVLLIL 420
>UniRef50_A4AGB0 Cluster: Integral membrane protein; n=3;
Actinobacteria (class)|Rep: Integral membrane protein -
marine actinobacterium PHSC20C1
Length = 313
Score = 33.1 bits (72), Expect = 4.7
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = -1
Query: 432 LKSLSMERVRAVMMLGATTFLCTPIMNSKTNNVEVTAKKG*FHKDCVSETTGVRGSINQW 253
L SL++ + V LGA + T IMNS+ + + A CV GV ++
Sbjct: 87 LSSLAIAPIMVVQPLGAVALVMTAIMNSRLTKIRLDAISIRAIVMCVG-GVGVFVALAAM 145
Query: 252 YA---AIAVQTDTIVSRILHLIVAGW 184
+A IA + +IV +L +++AGW
Sbjct: 146 FAKSTPIAARELSIVLIVLVIVLAGW 171
>UniRef50_Q7N9K1 Cluster: Putative uncharacterized protein; n=1;
Photorhabdus luminescens subsp. laumondii|Rep: Putative
uncharacterized protein - Photorhabdus luminescens
subsp. laumondii
Length = 130
Score = 32.7 bits (71), Expect = 6.2
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -1
Query: 387 GATTFLCTPIMNSKTNNVEVTAKKG*FHKDCVSETTGVRGSINQW 253
G F CTPI+ S E+T K F+ C + T + W
Sbjct: 80 GGVAFECTPIIESTKEKTEITIKNDGFYLHCSTRTMVIEDITPHW 124
>UniRef50_Q1AZ18 Cluster: Putative uncharacterized protein
precursor; n=1; Rubrobacter xylanophilus DSM 9941|Rep:
Putative uncharacterized protein precursor - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 331
Score = 32.7 bits (71), Expect = 6.2
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 203 WRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWN-HPFFAVTSTLLVLLFMIGV 367
WR +++ C +AA +WL+ PL +SL + W+ + AV + VL +I +
Sbjct: 208 WRREPRVIAGCLLLAALYWLLYPLLGTLSLRAAGWDGSGWLAVFAAQYVLFLVIPI 263
>UniRef50_Q4W9E4 Cluster: GABA permease, putative; n=6;
Eurotiomycetidae|Rep: GABA permease, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 522
Score = 32.7 bits (71), Expect = 6.2
Identities = 16/69 (23%), Positives = 31/69 (44%)
Frame = +2
Query: 200 RWRILLTIVSVCTAIAAYHWLMDPLTPVVSLTQSLWNHPFFAVTSTLLVLLFMIGVHRKV 379
RW + + IV + + A W + P V++ W+ F V L ++++ + R+
Sbjct: 453 RWGLTVNIVGLLYCMFALFWALWPSETPVTVDNFNWSVVIFGVVFVLSLVMYAVKGRREY 512
Query: 380 VAPSIITAR 406
P +I R
Sbjct: 513 HGPVVIVRR 521
>UniRef50_Q8DLK7 Cluster: Sensor protein; n=2; Synechococcus
elongatus|Rep: Sensor protein - Synechococcus elongatus
(Thermosynechococcus elongatus)
Length = 710
Score = 32.3 bits (70), Expect = 8.2
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 254 HWLMDPLTPVVSLTQSLWNHP 316
H L +PLT ++ LTQ LW HP
Sbjct: 257 HELKNPLTAILGLTQLLWQHP 277
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,567,061
Number of Sequences: 1657284
Number of extensions: 8625952
Number of successful extensions: 24428
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 23734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24423
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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