Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0528
         (570 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    28   0.25 
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona...    26   0.75 
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   5.3  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    23   7.0  
AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative apyrase/n...    23   9.3  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   9.3  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 27.9 bits (59), Expect = 0.25
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 283 YRCQRIHQPMVCCYCCTN 230
           + C R   P+ CC+CC +
Sbjct: 538 FSCYRNRMPICCCFCCAS 555


>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
            anion exchanger protein.
          Length = 1102

 Score = 26.2 bits (55), Expect = 0.75
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
 Frame = +2

Query: 302  LWNHPFFAVTSTL--LVLLFMIGVHRKVVAPSIITARTRSILND 427
            LW    F++TS L  L+L+ MIGV + +    I T R   IL+D
Sbjct: 997  LWLIKSFSITSILFPLMLVVMIGVRKSL--DYIFTKRELKILDD 1038


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 5.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 173 IACLQPATMRWRILLTIVSVCTAIAAY 253
           IA ++     + ILLTI + C A+A Y
Sbjct: 107 IAIVEWKPFEYLILLTIFANCVALAVY 133


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.0 bits (47), Expect = 7.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 429 STCLVTILANLF*SRDQQIAHYFKYY 506
           S  LV IL+  +   D Q  H F YY
Sbjct: 212 SLSLVIILSQYYLQPDFQFCHTFAYY 237


>AJ441131-4|CAD29633.1|  566|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 188 PATMRWRILLTIVSVCTAIAA 250
           PA +R+ I LT+ +VC    A
Sbjct: 5   PALLRFGICLTVTAVCGVCCA 25


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 9.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 188 PATMRWRILLTIVSVCTAIAA 250
           PA +R+ I LT+ +VC    A
Sbjct: 5   PALLRFGICLTVTAVCGVCCA 25


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,305
Number of Sequences: 2352
Number of extensions: 9853
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 53824896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)