Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0525
(347 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 159 2e-39
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 159 2e-39
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 159 2e-39
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 159 2e-39
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 159 2e-39
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 159 2e-39
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 2e-19
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 0.43
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 2.3
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 2.3
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 2.3
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 2.3
BC013983-1|AAH13983.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 7.0
BC003017-1|AAH03017.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 7.0
BC000460-1|AAH00460.1| 433|Homo sapiens sparc/osteonectin, cwcv... 28 7.0
AY358973-1|AAQ89332.1| 436|Homo sapiens HSAJ1454 protein. 28 7.0
AY160217-1|AAO17576.1| 577|Homo sapiens xenobiotic/medium-chain... 28 7.0
AJ001454-1|CAA04775.1| 436|Homo sapiens testican-3 protein. 28 7.0
AB073604-1|BAD38642.1| 577|Homo sapiens putative protein produc... 28 7.0
AB056866-1|BAB64908.1| 313|Homo sapiens testican 3 splicing var... 28 7.0
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 159 bits (386), Expect = 2e-39
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +3
Query: 3 KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL
Sbjct: 99 RILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 281
DK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 159 DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 159 bits (386), Expect = 2e-39
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +3
Query: 3 KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL
Sbjct: 97 RILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 156
Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 281
DK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 157 DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 159 bits (386), Expect = 2e-39
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +3
Query: 3 KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL
Sbjct: 99 RILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 281
DK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 159 DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 159 bits (386), Expect = 2e-39
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +3
Query: 3 KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL
Sbjct: 99 RILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 281
DK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 159 DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 159 bits (386), Expect = 2e-39
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +3
Query: 3 KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL
Sbjct: 99 RILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 281
DK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 159 DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 159 bits (386), Expect = 2e-39
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = +3
Query: 3 KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHL
Sbjct: 99 RILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHL 158
Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 281
DK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 159 DKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 2e-19
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +3
Query: 63 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 218
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 32.3 bits (70), Expect = 0.43
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -2
Query: 235 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 101
T W ++ LCS++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 159 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 242
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 159 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 242
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 159 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 242
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 159 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 242
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
>BC013983-1|AAH13983.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 15 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 179
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 215 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 274
Query: 180 LDKNQQTT 203
LDKN+Q T
Sbjct: 275 LDKNEQCT 282
>BC003017-1|AAH03017.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 15 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 179
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 215 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 274
Query: 180 LDKNQQTT 203
LDKN+Q T
Sbjct: 275 LDKNEQCT 282
>BC000460-1|AAH00460.1| 433|Homo sapiens sparc/osteonectin, cwcv
and kazal-like domains proteoglycan (testican) 3
protein.
Length = 433
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 15 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 179
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 215 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 274
Query: 180 LDKNQQTT 203
LDKN+Q T
Sbjct: 275 LDKNEQCT 282
>AY358973-1|AAQ89332.1| 436|Homo sapiens HSAJ1454 protein.
Length = 436
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 15 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 179
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 218 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 277
Query: 180 LDKNQQTT 203
LDKN+Q T
Sbjct: 278 LDKNEQCT 285
>AY160217-1|AAO17576.1| 577|Homo sapiens xenobiotic/medium-chain
fatty acid:CoA ligase protein.
Length = 577
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 235 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 101
T W ++ L S++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILGSLLESWTLGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>AJ001454-1|CAA04775.1| 436|Homo sapiens testican-3 protein.
Length = 436
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 15 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 179
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 218 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 277
Query: 180 LDKNQQTT 203
LDKN+Q T
Sbjct: 278 LDKNEQCT 285
>AB073604-1|BAD38642.1| 577|Homo sapiens putative protein product
of HYST1046 protein.
Length = 577
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -2
Query: 235 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 101
T W ++ L S++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILGSLLESWTLGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>AB056866-1|BAB64908.1| 313|Homo sapiens testican 3 splicing
variant protein.
Length = 313
Score = 28.3 bits (60), Expect = 7.0
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Frame = +3
Query: 15 KPSHKTRVANKQK----RP-RSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVH 179
K H++ NK+ RP RSR TS+ + L + + + LD S+L ++
Sbjct: 215 KALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIY 274
Query: 180 LDKNQQTT 203
LDKN+Q T
Sbjct: 275 LDKNEQCT 282
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,326,294
Number of Sequences: 237096
Number of extensions: 911651
Number of successful extensions: 1683
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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