Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0525
         (347 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   175   1e-44
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   175   1e-44
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   175   1e-44
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   175   1e-44
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   132   9e-32
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   132   9e-32
AY119505-1|AAM50159.1|  129|Drosophila melanogaster GH12418p pro...    27   8.6  
AY094853-1|AAM11206.1|  347|Drosophila melanogaster RE13621p pro...    27   8.6  
AY058433-1|AAL13662.1| 1329|Drosophila melanogaster GH21134p pro...    27   8.6  
AF188475-1|AAF37818.1| 1329|Drosophila melanogaster PDZ domain p...    27   8.6  
AF188474-1|AAF37817.1| 1329|Drosophila melanogaster PDZ domain p...    27   8.6  
AF188473-1|AAF37816.1| 1329|Drosophila melanogaster PDZ domain p...    27   8.6  
AE014296-2711|AAF49481.1|  347|Drosophila melanogaster CG4933-PA...    27   8.6  
AE013599-3348|AAX52678.1| 1329|Drosophila melanogaster CG6741-PC...    27   8.6  
AE013599-3347|AAF46809.2| 1329|Drosophila melanogaster CG6741-PB...    27   8.6  
AE013599-3346|AAF46810.2| 1329|Drosophila melanogaster CG6741-PA...    27   8.6  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  175 bits (427), Expect = 1e-44
 Identities = 84/96 (87%), Positives = 89/96 (92%)
 Frame = +3

Query: 3   KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
           KILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHL
Sbjct: 97  KILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHL 156

Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
           DKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 157 DKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  175 bits (427), Expect = 1e-44
 Identities = 84/96 (87%), Positives = 89/96 (92%)
 Frame = +3

Query: 3   KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
           KILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHL
Sbjct: 97  KILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHL 156

Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
           DKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 157 DKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  175 bits (427), Expect = 1e-44
 Identities = 84/96 (87%), Positives = 89/96 (92%)
 Frame = +3

Query: 3   KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
           KILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHL
Sbjct: 97  KILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHL 156

Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
           DKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 157 DKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  175 bits (427), Expect = 1e-44
 Identities = 84/96 (87%), Positives = 89/96 (92%)
 Frame = +3

Query: 3   KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
           KILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHL
Sbjct: 97  KILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHL 156

Query: 183 DKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
           DKNQQTTIEHKVDTF SVYKKLTGR+VTFEFP+ YL
Sbjct: 157 DKNQQTTIEHKVDTFTSVYKKLTGRDVTFEFPDNYL 192


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  132 bits (320), Expect = 9e-32
 Identities = 64/72 (88%), Positives = 67/72 (93%)
 Frame = +3

Query: 3   KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
           KILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHL
Sbjct: 97  KILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHL 156

Query: 183 DKNQQTTIEHKV 218
           DKNQQTTIEHKV
Sbjct: 157 DKNQQTTIEHKV 168


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  132 bits (320), Expect = 9e-32
 Identities = 64/72 (88%), Positives = 67/72 (93%)
 Frame = +3

Query: 3   KILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHL 182
           KILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRIRVKLDGSQL+KVHL
Sbjct: 97  KILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRIRVKLDGSQLVKVHL 156

Query: 183 DKNQQTTIEHKV 218
           DKNQQTTIEHKV
Sbjct: 157 DKNQQTTIEHKV 168


>AY119505-1|AAM50159.1|  129|Drosophila melanogaster GH12418p
           protein.
          Length = 129

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 280 SGNSKVTSRPVSFLYTDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTI 122
           SGN +   RP   L+    +  L  I++   +  CT MSC  +N  ++ L  I
Sbjct: 73  SGNCEDGIRPSWLLWLTITLGVLFLIMLLMNIFLCTAMSCSCANTEVINLTFI 125


>AY094853-1|AAM11206.1|  347|Drosophila melanogaster RE13621p
           protein.
          Length = 347

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 50  KEATLKDIDLCVRCYPRGLGL 112
           KEA LK  DL V CY +G G+
Sbjct: 62  KEAQLKSSDLDVICYTKGPGM 82


>AY058433-1|AAL13662.1| 1329|Drosophila melanogaster GH21134p protein.
          Length = 1329

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 189  NQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
            NQQ   +++  T QS+Y K + + V+   P PY+
Sbjct: 1135 NQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYV 1168


>AF188475-1|AAF37818.1| 1329|Drosophila melanogaster PDZ domain
            protein Arc protein.
          Length = 1329

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 189  NQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
            NQQ   +++  T QS+Y K + + V+   P PY+
Sbjct: 1135 NQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYV 1168


>AF188474-1|AAF37817.1| 1329|Drosophila melanogaster PDZ domain
            protein Arc protein.
          Length = 1329

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 189  NQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
            NQQ   +++  T QS+Y K + + V+   P PY+
Sbjct: 1135 NQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYV 1168


>AF188473-1|AAF37816.1| 1329|Drosophila melanogaster PDZ domain
            protein Arc protein.
          Length = 1329

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 189  NQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
            NQQ   +++  T QS+Y K + + V+   P PY+
Sbjct: 1135 NQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYV 1168


>AE014296-2711|AAF49481.1|  347|Drosophila melanogaster CG4933-PA
           protein.
          Length = 347

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +2

Query: 50  KEATLKDIDLCVRCYPRGLGL 112
           KEA LK  DL V CY +G G+
Sbjct: 62  KEAQLKSSDLDVICYTKGPGM 82


>AE013599-3348|AAX52678.1| 1329|Drosophila melanogaster CG6741-PC,
            isoform C protein.
          Length = 1329

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 189  NQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
            NQQ   +++  T QS+Y K + + V+   P PY+
Sbjct: 1135 NQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYV 1168


>AE013599-3347|AAF46809.2| 1329|Drosophila melanogaster CG6741-PB,
            isoform B protein.
          Length = 1329

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 189  NQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
            NQQ   +++  T QS+Y K + + V+   P PY+
Sbjct: 1135 NQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYV 1168


>AE013599-3346|AAF46810.2| 1329|Drosophila melanogaster CG6741-PA,
            isoform A protein.
          Length = 1329

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 189  NQQTTIEHKVDTFQSVYKKLTGREVTFEFPEPYL 290
            NQQ   +++  T QS+Y K + + V+   P PY+
Sbjct: 1135 NQQQQQQNQQQTHQSLYIKHSPKSVSLFSPNPYV 1168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,079,058
Number of Sequences: 53049
Number of extensions: 258132
Number of successful extensions: 605
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)