Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0521
         (656 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY333996-1|AAR01121.1|  245|Anopheles gambiae arrestin protein.        26   0.91 
AY333995-1|AAR01120.1|  245|Anopheles gambiae arrestin protein.        26   0.91 
AY333994-1|AAR01119.1|  245|Anopheles gambiae arrestin protein.        26   0.91 
AY333993-1|AAR01118.1|  245|Anopheles gambiae arrestin protein.        26   0.91 
AY333992-1|AAR01117.1|  245|Anopheles gambiae arrestin protein.        26   0.91 
AY333991-1|AAR01116.1|  245|Anopheles gambiae arrestin protein.        26   0.91 
AY333990-1|AAR01115.1|  245|Anopheles gambiae arrestin protein.        26   0.91 
AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.        26   0.91 
AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.        26   0.91 
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    25   1.6  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    25   1.6  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    24   3.7  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   8.5  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   8.5  

>AY333996-1|AAR01121.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 49  KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 80


>AY333995-1|AAR01120.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 49  KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 80


>AY333994-1|AAR01119.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 49  KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 80


>AY333993-1|AAR01118.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 49  KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 80


>AY333992-1|AAR01117.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 49  KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 80


>AY333991-1|AAR01116.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 49  KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 80


>AY333990-1|AAR01115.1|  245|Anopheles gambiae arrestin protein.
          Length = 245

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 49  KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 80


>AY017417-1|AAG54081.1|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 177 KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 208


>AJ304409-1|CAC39103.2|  383|Anopheles gambiae arrestin protein.
          Length = 383

 Score = 26.2 bits (55), Expect = 0.91
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +3

Query: 267 KTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
           K  QQ  ++V+K+F L PG++  E+ L   +Y
Sbjct: 177 KQGQQPCTLVRKDFMLSPGELELEVTLDKQLY 208


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/45 (24%), Positives = 17/45 (37%)
 Frame = +2

Query: 29  PDGTQNHRGHVWRVGGARRGRFLWQGLHQGRPLRSIRRSMGRQVA 163
           PD   N  G  W+    +     W G  Q  P  ++ R  G+  +
Sbjct: 340 PDAATNPGGKPWKNNSPQAATDFWNGRAQWLPTWNLERDGGKSAS 384


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/45 (24%), Positives = 17/45 (37%)
 Frame = +2

Query: 29  PDGTQNHRGHVWRVGGARRGRFLWQGLHQGRPLRSIRRSMGRQVA 163
           PD   N  G  W+    +     W G  Q  P  ++ R  G+  +
Sbjct: 340 PDAATNPGGKPWKNNSPQAATDFWNGRAQWLPTWNLERDGGKSAS 384


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 156 WRPIERRMLRSGRPW*SPCQ 97
           W P   RM R G P+  PC+
Sbjct: 322 WLPFILRMSRPGEPYPHPCR 341


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +3

Query: 276 QQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGFPWESP 419
           Q L ++V ++     G+ +  +N R   + +     HF  A F W  P
Sbjct: 116 QDLAALVLQDLPTELGEYLISVNRRVDRFSKIYCCCHFSMATFFWFMP 163


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +3

Query: 120 DRSAAYAARWVAKSLVKAGLCRRCMVQVAYAIGVAEPLSITVFDYGTSHK 269
           +RS A AA   AKSL++  +      Q    I +AE       DYGT ++
Sbjct: 392 ERSMAAAAHRTAKSLLEKAIRTSKRQQFQELIDIAE-----TNDYGTGYR 436


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,172
Number of Sequences: 2352
Number of extensions: 15177
Number of successful extensions: 28
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)