Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0521
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 200 7e-52
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 200 7e-52
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 196 2e-50
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 196 2e-50
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 196 2e-50
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 190 6e-49
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 190 6e-49
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 183 9e-47
AF039049-3|AAB94251.2| 298|Caenorhabditis elegans Serpentine re... 32 0.41
Z81506-10|CAB04123.2| 270|Caenorhabditis elegans Hypothetical p... 29 2.2
AL023836-2|CAC42371.1| 270|Caenorhabditis elegans Hypothetical ... 29 2.2
AF039049-4|AAB94250.2| 293|Caenorhabditis elegans Serpentine re... 29 2.2
Z81523-10|CAC70089.1| 171|Caenorhabditis elegans Hypothetical p... 28 5.1
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 8.9
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 8.9
U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical p... 27 8.9
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 8.9
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 200 bits (488), Expect = 7e-52
Identities = 94/142 (66%), Positives = 109/142 (76%)
Frame = +3
Query: 3 IGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSAAYAARWVAKSLVKAGLC 182
IGGP DAGLTGRKIIVDTY KD TKVDRSAAYAARWVAKSLVKAGLC
Sbjct: 189 IGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLC 248
Query: 183 RRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
RRC+VQV+YAIGVA+PLS+ VF +GTS +++ LL+IV NFDLRPGKI+K L+L+ PIY
Sbjct: 249 RRCLVQVSYAIGVAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIY 308
Query: 363 QRTSTYGHFGRAGFPWESPKPL 428
+ T+ GHFG FPWE P+ L
Sbjct: 309 EPTAENGHFGHNNFPWEQPRNL 330
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 200 bits (488), Expect = 7e-52
Identities = 94/142 (66%), Positives = 109/142 (76%)
Frame = +3
Query: 3 IGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSAAYAARWVAKSLVKAGLC 182
IGGP DAGLTGRKIIVDTY KD TKVDRSAAYAARWVAKSLVKAGLC
Sbjct: 240 IGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLC 299
Query: 183 RRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
RRC+VQV+YAIGVA+PLS+ VF +GTS +++ LL+IV NFDLRPGKI+K L+L+ PIY
Sbjct: 300 RRCLVQVSYAIGVAKPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIY 359
Query: 363 QRTSTYGHFGRAGFPWESPKPL 428
+ T+ GHFG FPWE P+ L
Sbjct: 360 EPTAENGHFGHNNFPWEQPRNL 381
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 196 bits (477), Expect = 2e-50
Identities = 92/145 (63%), Positives = 109/145 (75%)
Frame = +3
Query: 3 IGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSAAYAARWVAKSLVKAGLC 182
IGGP DAGLTGRKIIVDTY KD TKVDRSAAYAARWVAKSLVK+GLC
Sbjct: 240 IGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKSGLC 299
Query: 183 RRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
RRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY
Sbjct: 300 RRCLVQVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIY 359
Query: 363 QRTSTYGHFGRAGFPWESPKPLIVE 437
+ T+ GHFG FPWE P+ L ++
Sbjct: 360 EPTAENGHFGHNEFPWEQPRHLQID 384
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 196 bits (477), Expect = 2e-50
Identities = 92/145 (63%), Positives = 109/145 (75%)
Frame = +3
Query: 3 IGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSAAYAARWVAKSLVKAGLC 182
IGGP DAGLTGRKIIVDTY KD TKVDRSAAYAARWVAKSLVK+GLC
Sbjct: 199 IGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKSGLC 258
Query: 183 RRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
RRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY
Sbjct: 259 RRCLVQVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIY 318
Query: 363 QRTSTYGHFGRAGFPWESPKPLIVE 437
+ T+ GHFG FPWE P+ L ++
Sbjct: 319 EPTAENGHFGHNEFPWEQPRHLQID 343
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 196 bits (477), Expect = 2e-50
Identities = 92/145 (63%), Positives = 109/145 (75%)
Frame = +3
Query: 3 IGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSAAYAARWVAKSLVKAGLC 182
IGGP DAGLTGRKIIVDTY KD TKVDRSAAYAARWVAKSLVK+GLC
Sbjct: 181 IGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKSGLC 240
Query: 183 RRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
RRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K+L+L+ PIY
Sbjct: 241 RRCLVQVSYAIGVAKPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIY 300
Query: 363 QRTSTYGHFGRAGFPWESPKPLIVE 437
+ T+ GHFG FPWE P+ L ++
Sbjct: 301 EPTAENGHFGHNEFPWEQPRHLQID 325
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 190 bits (464), Expect = 6e-49
Identities = 90/145 (62%), Positives = 106/145 (73%)
Frame = +3
Query: 3 IGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSAAYAARWVAKSLVKAGLC 182
+GGP DAGLTGRKIIVDTY KD TKVDRSAAYAARWVAKSLVKAGLC
Sbjct: 189 VGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLC 248
Query: 183 RRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
RRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K L+L+ IY
Sbjct: 249 RRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKRAIY 308
Query: 363 QRTSTYGHFGRAGFPWESPKPLIVE 437
+ T+ GHFG FPWE + L ++
Sbjct: 309 EPTAENGHFGHNDFPWEQARKLKID 333
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 190 bits (464), Expect = 6e-49
Identities = 90/145 (62%), Positives = 106/145 (73%)
Frame = +3
Query: 3 IGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSAAYAARWVAKSLVKAGLC 182
+GGP DAGLTGRKIIVDTY KD TKVDRSAAYAARWVAKSLVKAGLC
Sbjct: 240 VGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLC 299
Query: 183 RRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
RRC+VQV+YAIGVA+PLS+ VF +GTS + +LL IV NFDLRPG I+K L+L+ IY
Sbjct: 300 RRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKRAIY 359
Query: 363 QRTSTYGHFGRAGFPWESPKPLIVE 437
+ T+ GHFG FPWE + L ++
Sbjct: 360 EPTAENGHFGHNDFPWEQARKLKID 384
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 183 bits (446), Expect = 9e-47
Identities = 84/142 (59%), Positives = 107/142 (75%)
Frame = +3
Query: 3 IGGPQSDAGLTGRKIIVDTYXXXXXXXXXXXXXKDFTKVDRSAAYAARWVAKSLVKAGLC 182
+GGP DAG+TGRKIIVDTY KD TKVDRSAAYAARWVA SLVKAGL
Sbjct: 239 VGGPMGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVATSLVKAGLA 298
Query: 183 RRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIY 362
+R +VQ++YAIG+A+P+S+ V+ +GTS T ++L IV+ +FDL PGKI+KEL+L+ PIY
Sbjct: 299 KRVLVQLSYAIGIAKPISVLVYAFGTSPLTDEELHQIVEDSFDLTPGKIIKELDLKRPIY 358
Query: 363 QRTSTYGHFGRAGFPWESPKPL 428
++T+ GHFG + FPWE PK L
Sbjct: 359 EKTAENGHFGHSEFPWEQPKAL 380
>AF039049-3|AAB94251.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein66 protein.
Length = 298
Score = 31.9 bits (69), Expect = 0.41
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +2
Query: 98 WQGLHQGRPLRSIRRSMGRQVARQGGLVPALHGAGCLCYWCS*AIIDYSL 247
W + R L S + S G + Q L ALH L Y+C A++D SL
Sbjct: 23 WSSFYTIRKLASFKHSFGYLSSNQA-LADALHSTVFLLYFCPMALLDNSL 71
>Z81506-10|CAB04123.2| 270|Caenorhabditis elegans Hypothetical
protein F16H6.10 protein.
Length = 270
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 177 LCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIV 332
LC + V ++ V LSIT+ + + +KT L +++ DLRP ++
Sbjct: 73 LCSDDLESVLSSMRVLSHLSITISEESSLNKTDVTFLKHLKRILDLRPSSLI 124
>AL023836-2|CAC42371.1| 270|Caenorhabditis elegans Hypothetical
protein F16H6.10 protein.
Length = 270
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 177 LCRRCMVQVAYAIGVAEPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIV 332
LC + V ++ V LSIT+ + + +KT L +++ DLRP ++
Sbjct: 73 LCSDDLESVLSSMRVLSHLSITISEESSLNKTDVTFLKHLKRILDLRPSSLI 124
>AF039049-4|AAB94250.2| 293|Caenorhabditis elegans Serpentine
receptor, class x protein65 protein.
Length = 293
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +2
Query: 98 WQGLHQGRPLRSIRRSMGRQVARQGGLVPALHGAGCLCYWCS*AIIDYS 244
W + L S + S G A Q L ALH L Y+C A++D+S
Sbjct: 23 WSSFYSICKLTSYKHSFGYLSANQA-LADALHSTIFLLYFCPMALLDHS 70
>Z81523-10|CAC70089.1| 171|Caenorhabditis elegans Hypothetical
protein F32H2.10 protein.
Length = 171
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 219 VAEPLSITVFDYGTSH-KTQQQLLSIVQK 302
+++PLS +F+Y SH ++LL I+QK
Sbjct: 26 ISDPLSKQIFEYEQSHTPNDRELLEIIQK 54
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = -1
Query: 446 CKSFYNQRLGTLPGE---SCP---SKVSIGTCSLINWCSEVQLFD 330
CK N+ + GE SCP + S G+CS+IN C QL D
Sbjct: 1496 CKVHLNEVCRLMGGEPKCSCPVNYQRDSSGSCSIINECLFTQLND 1540
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = -1
Query: 446 CKSFYNQRLGTLPGE---SCP---SKVSIGTCSLINWCSEVQLFD 330
CK N+ + GE SCP + S G+CS+IN C QL D
Sbjct: 2080 CKVHLNEVCRLMGGEPKCSCPVNYQRDSSGSCSIINECLFTQLND 2124
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = -1
Query: 446 CKSFYNQRLGTLPGE---SCP---SKVSIGTCSLINWCSEVQLFD 330
CK N+ + GE SCP + S G+CS+IN C QL D
Sbjct: 1496 CKVHLNEVCRLMGGEPKCSCPVNYQRDSSGSCSIINECLFTQLND 1540
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = -1
Query: 446 CKSFYNQRLGTLPGE---SCP---SKVSIGTCSLINWCSEVQLFD 330
CK N+ + GE SCP + S G+CS+IN C QL D
Sbjct: 2080 CKVHLNEVCRLMGGEPKCSCPVNYQRDSSGSCSIINECLFTQLND 2124
>U88308-19|AAB42328.1| 1927|Caenorhabditis elegans Hypothetical
protein C32E8.11 protein.
Length = 1927
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 510 HTYISVYYILMEYLHCSNAQVLQV 439
HTY SV +L Y+HC+ Q + V
Sbjct: 153 HTYESVIKVLELYIHCTKDQAMLV 176
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Frame = -1
Query: 446 CKSFYNQRLGTLPGE---SCP---SKVSIGTCSLINWCSEVQLFD 330
CK N+ + GE SCP + S G+CS+IN C QL D
Sbjct: 2080 CKVHLNEVCRLMGGEPKCSCPVNYQRDSSGSCSIINECLFTQLND 2124
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,021,677
Number of Sequences: 27780
Number of extensions: 325240
Number of successful extensions: 798
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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