Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0519
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.34 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        24   1.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   1.4  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.6  

>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +3

Query: 168 WNSHTTTPNGRRLDALVDDLAFDIVAPLTP 257
           +N H   PNG  + +L+D++++  +AP  P
Sbjct: 512 YNRHLVAPNGDHVISLIDEISY--MAPPAP 539


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 129 QSFPCRAAPRYHCLERSYPVE 67
           Q+  C  APRYH L+ + PV+
Sbjct: 300 QTAICFKAPRYHTLDITEPVK 320


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 11/26 (42%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -1

Query: 418 GTESGARPSFITTGRW--SESNSETT 347
           G    ARP  +TT RW  + ++S TT
Sbjct: 40  GRRRAARPGVVTTPRWGCARASSATT 65


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 65  INGRDNDRRVSSQ 27
           +NG DN RR SS+
Sbjct: 227 VNGSDNSRRASSR 239


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +3

Query: 585 KQVVAEDFLHRFKLPDDIRELLR 653
           K +VAE ++  F++ ++ +ELL+
Sbjct: 122 KDLVAEAYVSPFRIDNESQELLK 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,773
Number of Sequences: 336
Number of extensions: 2669
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)