Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0519
(706 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 89 7e-18
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 80 3e-15
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 80 3e-15
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 72 9e-13
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 72 9e-13
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 64 2e-10
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 64 2e-10
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 64 2e-10
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 64 2e-10
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 60 2e-09
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 60 3e-09
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 60 3e-09
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 59 7e-09
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 59 7e-09
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 58 1e-08
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 58 1e-08
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 58 1e-08
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 57 3e-08
M38643-2|AAA28940.1| 192|Drosophila melanogaster protein ( D.me... 54 2e-07
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 53 3e-07
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 44 3e-04
AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-P... 30 2.7
AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-P... 30 2.7
AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p pro... 29 4.7
AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,... 29 4.7
U41367-1|AAB04167.1| 1037|Drosophila melanogaster transcription ... 29 6.2
AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p pro... 29 6.2
AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA... 29 6.2
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 88.6 bits (210), Expect = 7e-18
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Frame = +3
Query: 3 ESSVCRISLTGHAPIVIASVYLPPDKIVLSSD-IEALLGMGSSVILAGDLNCKHVRWNSH 179
+++ I L + + +A+VY PP VL + ++ +G I AGD N KH W S
Sbjct: 89 QATSINIQLDDNTLLTLAAVYCPPRFTVLEAQFLDFFQALGPHFIAAGDYNAKHTHWGSR 148
Query: 180 TTTPNGRRLDALVDDLA--FDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVV 353
P G++L + D V+P +PT++P ++ PD++D A+ KN++ L E +
Sbjct: 149 LVNPKGKQLYKTIIKATNKLDHVSPGSPTYWPSDLNKLPDLIDFAVTKNISRSLVKAECL 208
Query: 354 SELDSDHRPVVMKLGRAPDSV-PVTR 428
+L SDH PV++ L R ++V P TR
Sbjct: 209 PDLSSDHSPVLIHLRRYAENVKPPTR 234
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 80.2 bits (189), Expect = 3e-15
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 4/119 (3%)
Frame = +3
Query: 51 IASVYLPPDKIVLSSD--IEALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRRL-DALVD 221
+A+VY PP + +S D +E +G I AGD N KH W S TP G++L +AL
Sbjct: 104 LAAVYCPP-RFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVTPKGKQLYNALTK 162
Query: 222 -DLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 395
+ D V+P PT++P + PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 163 PENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNM 221
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 79.8 bits (188), Expect = 3e-15
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 4/137 (2%)
Frame = +3
Query: 51 IASVYLPPDKIVLSSD--IEALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRRL-DALVD 221
+A+VY PP + +S D +E +G I AGD N KH W S +P G++L +AL
Sbjct: 104 LAAVYCPP-RFPISEDQFMEFFNTLGDRFIAAGDYNAKHTHWGSRLVSPKGKQLYNALTK 162
Query: 222 -DLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKLG 398
+ D V+P PT++P + PD++D A+ K+V + + E +++L SDH PV + +
Sbjct: 163 PENKLDYVSPGKPTYWPADPRKIPDLIDFAITKHVPRNMVTAEALADLSSDHSPVFLNML 222
Query: 399 RAPDSVPVTRTVVDWHT 449
P V + ++ T
Sbjct: 223 TRPHIVDPPYRLTNFRT 239
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 71.7 bits (168), Expect = 9e-13
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Frame = +3
Query: 3 ESSVCRISL-TGHAPIVIASVYLPPDKIVLSSDIEALLG-MGSSVILAGDLNCKHVRWNS 176
+ + R+ L T + +A+VYLPP + + D +++ +G+ I GD N KH W +
Sbjct: 89 DRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGN 148
Query: 177 HTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVS 356
+ P G+ L ++ + ++A PT Y N P LD + + ++ +
Sbjct: 149 PRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYNPLLTPSALDFFITCGYGMGRLDVQTLQ 208
Query: 357 ELDSDHRPVVMKLGRAPDSVP 419
EL SDH P++ L P P
Sbjct: 209 ELSSDHLPILAVLHATPLKKP 229
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 71.7 bits (168), Expect = 9e-13
Identities = 57/212 (26%), Positives = 89/212 (41%), Gaps = 2/212 (0%)
Frame = +3
Query: 30 TGHAPIVIASVYLPPDKIVLSSDIEALLG-MGSSVILAGDLNCKHVRWNSHTTTPNGRRL 206
T PI +VY PP + + + +L + I+AGD N H W + + G L
Sbjct: 98 TALGPISFGAVYCPPRFAWTTDEFKDILEEFQTKFIVAGDWNASHWLWGAGRSNQRGIAL 157
Query: 207 DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHS-IEVVSELDSDHRPV 383
LV + D +A PT YP P +D AL K V L +H+ I V EL SDH P+
Sbjct: 158 ANLVLNSEVDSLATGGPTRYPYGCRGSPGYIDFALTKGV-LGIHANISAVVELSSDHLPL 216
Query: 384 VMKLGRAPDSVPVTRTVVDWHTLGIXXXXXXXXXXXXXXXXXXXXXXXAEAIDILTSHIT 563
V+ L S P ++ T + +AI++LT++I
Sbjct: 217 VITLDAGAISYPKMERLITRRT-NLEVFQSQLESTLPLNTAINSGQDVDDAIELLTNNIK 275
Query: 564 STLDRSSKQVVAEDFLHRFKLPDDIRELLRAK 659
S +++ + + R +P +I L+ K
Sbjct: 276 SAARLATRSISRQPAADRIPIPREILLLIAEK 307
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 64.1 bits (149), Expect = 2e-10
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Frame = +3
Query: 30 TGHAPIVIASVYLPPD-KIVLSSDIEALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRRL 206
TG + +++Y P +I + + G ++ GD N +H W +P GR L
Sbjct: 99 TGLGDLQFSAIYCSPSTRIEERHFTDIIRACGQRYLVGGDWNARHWLWGDTCNSPRGREL 158
Query: 207 DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVV 386
+ I+A +PT YP +H P +D A+ + L +I +LDSDH P++
Sbjct: 159 AEALSVTGAKILATGSPTRYPYVPSHTPSCIDFAVYHGIPDHLATITQSWDLDSDHLPLI 218
Query: 387 MKLGRAPDSVPVTRTVVDWHT 449
+ + V + +V HT
Sbjct: 219 ISIETDSTHVNPSPRLVTKHT 239
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Frame = +3
Query: 6 SSVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNSH 179
SS R +T API VY L + E LL S IL GD NCKH W ++
Sbjct: 109 SSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNY 168
Query: 180 TTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVS 356
+ GR L +++ DIVA TH+P + +P LD A+ K +
Sbjct: 169 LSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHTQKLKTYSTD 228
Query: 357 ELDSDHRPVVMKL 395
EL SDH P+ + L
Sbjct: 229 ELSSDHLPIQIVL 241
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Frame = +3
Query: 6 SSVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNSH 179
SS R +T API VY L + E LL S IL GD NCKH W ++
Sbjct: 109 SSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNY 168
Query: 180 TTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVS 356
+ GR L +++ DIVA TH+P + +P LD A+ K +
Sbjct: 169 LSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHTQKLKTYSTD 228
Query: 357 ELDSDHRPVVMKL 395
EL SDH P+ + L
Sbjct: 229 ELSSDHLPIQIVL 241
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 64.1 bits (149), Expect = 2e-10
Identities = 45/133 (33%), Positives = 60/133 (45%), Gaps = 3/133 (2%)
Frame = +3
Query: 6 SSVCRISLTGHAPIVIASVY--LPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNSH 179
SS R +T API VY L + E LL S IL GD NCKH W ++
Sbjct: 109 SSRIRADMTIVAPIYCPPVYKWTTEQFSKLFNHFEMLLDGKSKFILGGDWNCKHRLWGNY 168
Query: 180 TTTPNGRRLD-ALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVS 356
+ GR L +++ DIVA TH+P + +P LD A+ K +
Sbjct: 169 LSCARGRSLSQSILARKDLDIVATGHATHFPFDKKKQPSALDFAICKGFHTQKLKTYSTD 228
Query: 357 ELDSDHRPVVMKL 395
EL SDH P+ + L
Sbjct: 229 ELSSDHLPIQIVL 241
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 60.5 bits (140), Expect = 2e-09
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 45 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRR 203
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 204 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 380
L +A+ D +I+A TH+P + P +D ++ K + I V++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSVADLSSDHLP 232
Query: 381 VVMKL 395
+++++
Sbjct: 233 ILLEI 237
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 60.1 bits (139), Expect = 3e-09
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 45 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRR 203
IVIASVY PP L +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLRWLPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 204 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 380
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADSTAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRFEKRISSGADLSSDHLP 232
Query: 381 VVMKL 395
+++++
Sbjct: 233 ILLEI 237
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 60.1 bits (139), Expect = 3e-09
Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 45 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRR 203
IVIASVY PP +D+ E +G + +IL GD N KH +W G
Sbjct: 125 IVIASVYCPPSLSWSPHHFTDVLNFAEKTMGGQTKLILCGDWNAKHRQWGCIRACQRGAA 184
Query: 204 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 380
L DA+ D +IVA + TH+P + P +D ++ K + I + L SDH P
Sbjct: 185 LYDAIQADSMAEIVATGSATHFPHDTRKSPSAIDFSICKRLGRYEKRISSSAHLSSDHLP 244
Query: 381 VVMKL 395
+++++
Sbjct: 245 ILLEI 249
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 58.8 bits (136), Expect = 7e-09
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +3
Query: 78 KIVLSSDIEALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRRLDALVDDLAFDIVAPLTP 257
K + SD+ + + + ++ GD N +H W G+ L+ L D F I+ P P
Sbjct: 139 KSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQP 198
Query: 258 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMK 392
T+ P N + LD+ L N+ +L + V+ EL SDH PVV+K
Sbjct: 199 TYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIK 242
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 58.8 bits (136), Expect = 7e-09
Identities = 34/105 (32%), Positives = 53/105 (50%)
Frame = +3
Query: 78 KIVLSSDIEALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRRLDALVDDLAFDIVAPLTP 257
K + SD+ + + + ++ GD N +H W G+ L+ L D F I+ P P
Sbjct: 87 KSLYRSDLLKISQINGNFLICGDFNSRHRAWKCTRANGWGKILNELSDLGKFSILYPTQP 146
Query: 258 THYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMK 392
T+ P N + LD+ L N+ +L + V+ EL SDH PVV+K
Sbjct: 147 TYIPHNHKAKASTLDLC-LTNIPNQLANPAVMQELSSDHLPVVIK 190
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 1e-08
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 45 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRR 203
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 204 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 380
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 232
Query: 381 VVMKL 395
+++++
Sbjct: 233 ILLEI 237
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 58.0 bits (134), Expect = 1e-08
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 45 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRR 203
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 75 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 134
Query: 204 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 380
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 135 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 194
Query: 381 VVMKL 395
+++++
Sbjct: 195 ILLEI 199
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 58.0 bits (134), Expect = 1e-08
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 45 IVIASVYLPPDKIVLS---SDI----EALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRR 203
IVIASVY PP +D+ E LG + IL GD N KH +W G
Sbjct: 113 IVIASVYCPPSLSWSPHHFTDVLNFAEKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTA 172
Query: 204 L-DALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSELDSDHRP 380
L +A+ D +I+A TH+P + P +D ++ K + I ++L SDH P
Sbjct: 173 LYEAVQADPMAEIIATGCATHFPHDTRKNPSAIDFSICKGLGRLEKRISSSADLSSDHLP 232
Query: 381 VVMKL 395
+++++
Sbjct: 233 ILLEI 237
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 56.8 bits (131), Expect = 3e-08
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 5/137 (3%)
Frame = +3
Query: 45 IVIASVYLPPDKIVLSSDI-EALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRRLDALVD 221
I I + Y+PP +I SSDI E L + S IL GDLN W S T G++++ ++
Sbjct: 101 INIVNAYIPPSQIFSSSDISEILQNLNGSTILLGDLNSWSPLWGSPRTNTRGKKIETVIL 160
Query: 222 DLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSEL-DSDHRPVVMKLG 398
+ + ++ +PTH L+ + +DI+L+ + S + L SDH P+ + +
Sbjct: 161 ENSLIVLNDGSPTH--LSTHNTFTHIDISLISPQIAHMCSWSISDNLHGSDHFPITIHIN 218
Query: 399 ---RAPDSVPVTRTVVD 440
R +++P+ + D
Sbjct: 219 TPTRPDNTLPLPKYKTD 235
>M38643-2|AAA28940.1| 192|Drosophila melanogaster protein (
D.melanogaster mobileelement jockey gag-specific protein
gene, complete cds.).
Length = 192
Score = 54.0 bits (124), Expect = 2e-07
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +3
Query: 3 ESSVCRISL-TGHAPIVIASVYLPPDKIVLSSDIEALLG-MGSSVILAGDLNCKHVRWNS 176
+ + R+ L T + +A+VYLPP + + D +++ +G+ I GD N KH W +
Sbjct: 89 DRQIARVHLQTSVGTVTVAAVYLPPAERWIVDDFKSMFAALGNKFIAGGDYNAKHAWWGN 148
Query: 177 HTTTPNGRRLDALVDDLAFDIVAPLTPTHYPLN 275
+ P G+ L ++ + ++A PT Y N
Sbjct: 149 PRSCPRGKMLQEVIAHGQYQVLATGEPTFYSYN 181
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 53.2 bits (122), Expect = 3e-07
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +3
Query: 102 EALLGMGSSVILAGDLNCKHVRWNSHTTTPNGRRL-DALVDDLAFDIVAPLTPTHYPLNI 278
E LG + IL GD N KH +W G L +A+ D +I+A TH+P +
Sbjct: 23 EKTLGGQTKFILCGDWNAKHRQWGCTRACQRGTALYEAVQADPMAEIIATGCATHFPHDT 82
Query: 279 AHRPDILDIALLKNVTLRLHSIEVVSELDSDHRPVVMKL 395
P +D ++ K + I ++L SDH P+++++
Sbjct: 83 RKNPSAIDFSICKGLGRLEKRISSSADLSSDHLPILLEI 121
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/127 (21%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Frame = +3
Query: 21 ISLTGHAPIVIASVYLPPDKIVLSSDIEALLGMGSSV-ILAGDLNCKHVRWNSHTTTPNG 197
I++ + I S Y+ P K + + + + + ++ GD N H W S TT G
Sbjct: 89 INIESKLKLNIFSTYISPTKNITNQTLHNTFNIQQTPSLITGDFNGWHHPWGSPTTNKRG 148
Query: 198 RRLDALVDDLAFDIVAPLTPTHYPLNIAHRPDILDIALLKNVTLRLHSIEVVSEL-DSDH 374
+ +D++ ++ +PTH+ + + +D+ L + +++++L SDH
Sbjct: 149 KITHRFIDNMHLILLNDKSPTHFSTHNTYTH--IDLTLCSPILAPHAKWKILNDLHGSDH 206
Query: 375 RPVVMKL 395
P++ L
Sbjct: 207 FPIITTL 213
>AE014296-2334|AAO41253.1| 653|Drosophila melanogaster CG17364-PB,
isoform B protein.
Length = 653
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 60 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNSHTTTPNGR 200
V+ PD LSSD+ LLG+ + + + L C + S T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AE014296-2333|AAF49781.3| 804|Drosophila melanogaster CG17364-PA,
isoform A protein.
Length = 804
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 60 VYLPPDKIVLSSDIEALLGMGSSVILAGDLNCKHVRWNSHTTTPNGR 200
V+ PD LSSD+ LLG+ + + + L C + S T P R
Sbjct: 228 VFCTPDLSELSSDLPTLLGVSTGIAVLAGLICMVLHLFSKTKYPRHR 274
>AY069120-1|AAL39265.1| 224|Drosophila melanogaster GH13185p
protein.
Length = 224
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 120 GSSVILAGDLNCKHVRWNSHTTTPNGRRLDALVDDLAFDIVAP 248
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>AE014134-460|AAF51216.1| 224|Drosophila melanogaster CG9960-PA,
isoform A protein.
Length = 224
Score = 29.5 bits (63), Expect = 4.7
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +3
Query: 120 GSSVILAGDLNCKHVRWNSHTTTPNGRRLDALVDDLAFDIVAP 248
G S+ LA D+N K T T NG RLD++ LA D + P
Sbjct: 66 GFSLCLATDINPKACNATRRTATRNGARLDSIRCSLA-DALRP 107
>U41367-1|AAB04167.1| 1037|Drosophila melanogaster transcription
factor protein.
Length = 1037
Score = 29.1 bits (62), Expect = 6.2
Identities = 23/97 (23%), Positives = 45/97 (46%)
Frame = -1
Query: 451 SVCQSTTVLVTGTESGARPSFITTGRWSESNSETTSIECKRRVTFFNNAMSSISGRCAIF 272
++ + V+ + + S A + IT G SN+ + E +++ N+ S+ S A
Sbjct: 503 NIAIKSNVVTSISSSTATTNTITKGT---SNNSIKTTENVNVISYSKNSSSTSSSSKAT- 558
Query: 271 SG**VGVSGATISKARSSTNASSRLPFGVVVCEFHLT 161
G SGA I+ ++T A + +P G + + +T
Sbjct: 559 ----TGASGAVITNIPTTTTAGTSVPVGKSITQLKMT 591
>AY071067-1|AAL48689.1| 844|Drosophila melanogaster RE14386p
protein.
Length = 844
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 309 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 458
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
>AE014297-2516|AAF55550.1| 844|Drosophila melanogaster CG7678-PA
protein.
Length = 844
Score = 29.1 bits (62), Expect = 6.2
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +3
Query: 309 LLKNVTLRLHSIEVVSELDSDHRPVVMK--LGRAPD-SVPVTRTVVDWHTLGI 458
++KNV RL ++V+ SDHR V++ L + P S V + +HTL +
Sbjct: 267 MVKNVRTRLEDLQVIINQTSDHRTCVLQAALKQLPTWSAMVKKMKGIYHTLNL 319
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,027,198
Number of Sequences: 53049
Number of extensions: 595231
Number of successful extensions: 1402
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1377
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3108380451
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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