Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0518
         (713 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   5.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   5.4  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   9.5  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    23   9.5  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 502 SPRETSRPSSGACCLARSLLSPLVSAPCSASGP 600
           S R  ++P+S    L  ++ SP++S   SAS P
Sbjct: 177 SARRKTKPNSPLGSLLAAVTSPVLSRISSASSP 209


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 576  GDERRQEAARETAGAGTRS 520
            G +RRQE     AGAG R+
Sbjct: 1370 GSQRRQEQFMRNAGAGIRN 1388


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 387 CLRAVMRRLAHPDPHVQV 440
           CL +  +RL HP PHV V
Sbjct: 112 CLNS--QRLNHPSPHVDV 127


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 387 CLRAVMRRLAHPDPHVQV 440
           CL +  +RL HP PHV V
Sbjct: 112 CLNS--QRLNHPSPHVDV 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,546
Number of Sequences: 2352
Number of extensions: 11939
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)