Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0517
(684 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 26 0.33
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 26 0.33
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 24 1.3
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 23 1.8
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 23 1.8
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 23 2.3
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 22 4.1
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 21 7.1
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 7.1
AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosin... 21 9.4
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.4
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 9.4
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 25.8 bits (54), Expect = 0.33
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 269 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 385
A PYG + ++ + PP+DD L +D G CG
Sbjct: 332 AHPYGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCG 373
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 25.8 bits (54), Expect = 0.33
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Frame = +2
Query: 269 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 385
A PYG + ++ + PP+DD L +D G CG
Sbjct: 333 AHPYGTTRLMSSFAFDNNDQGPPQDDAGNLISPSINDDGTCG 374
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 23.8 bits (49), Expect = 1.3
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -3
Query: 520 TNDVLSVQSLQDTARFISHTDHLDVLSTRFAETVADHFGYTSVYSSAQTSVRGHSNKQLL 341
TN+VL +S ++ + L + + + HFG T VY+S + + + +
Sbjct: 106 TNNVLVHRSQNSNDVCLAIPESLVIKLVDYHHQLLGHFGATKVYNSMKREYYWPNMYRTI 165
Query: 340 GVIFRRCNL 314
R C+L
Sbjct: 166 KKRLRSCDL 174
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 320 TPPEDDPKQLFVAMTSDRGLCG 385
TPPEDD + L +++S L G
Sbjct: 668 TPPEDDAESLNQSISSPGALSG 689
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 320 TPPEDDPKQLFVAMTSDRGLCG 385
TPPEDD + L +++S L G
Sbjct: 560 TPPEDDAESLNQSISSPGALSG 581
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 23.0 bits (47), Expect = 2.3
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +2
Query: 269 ARPYGEGAVQF---YERAEVTPPEDDPKQLFVAMTSDRGLCG 385
A PYG + ++ + PP+D L +D G CG
Sbjct: 333 AHPYGTTRLMSSFAFDNNDQGPPQDGAGNLISPSINDDGTCG 374
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 370 QRFVRSCTHWCIQSDPQPSRRT 435
+RFV+ T++ DP P +T
Sbjct: 461 KRFVKLWTNFAKNGDPNPKEKT 482
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 370 QRFVRSCTHWCIQSDPQPSRRT 435
+RFV+ T + DP P +T
Sbjct: 462 KRFVKLWTSFAKNGDPNPKEKT 483
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.1
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -3
Query: 373 SVRGHSNKQLLGVIFRRCNLS 311
++ GH LL +IF +C L+
Sbjct: 79 AIYGHPLFPLLALIFEKCELA 99
>AY618898-1|AAU87291.1| 803|Tribolium castaneum receptor tyrosine
kinase Torso-likeprotein protein.
Length = 803
Score = 21.0 bits (42), Expect = 9.4
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +2
Query: 281 GEGAVQFYERAEVTPPEDDPKQLFVAMTSD 370
GEGA RA + ED+ Q+ V M +
Sbjct: 458 GEGAFGIVRRAFLDLKEDNKTQVAVKMLKE 487
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 9.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 100 RHPVRSVPTFCKFYGCLSVKF 38
RH VRSV + +G +++K+
Sbjct: 373 RHSVRSVFFLSEIFGLVNLKY 393
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 237 LAADTIFMDCVIFWIFFTDL 178
LAA IF D V++ + +DL
Sbjct: 147 LAASVIFFDVVVWGLSASDL 166
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,368
Number of Sequences: 336
Number of extensions: 4089
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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