Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0517
         (684 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    27   0.73 
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    27   0.73 
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    26   1.3  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    26   1.3  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    24   3.9  
DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    24   5.1  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           24   5.1  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           24   5.1  
AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding pr...    24   5.1  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    24   5.1  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    23   9.0  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   9.0  

>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = -3

Query: 178 KTDGNGLQSSHIXCLADGKPPPRLGCRH-----PVRSVPTFCKFYGCLSVK--FTSRRKN 20
           +TDGNG  SS    L    PP    CR+      ++    +CK+  C   K   T+ R+ 
Sbjct: 19  RTDGNGAASSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRACQCEKCCLTAERQR 78

Query: 19  IAGRQ 5
           +   Q
Sbjct: 79  VMALQ 83


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 26.6 bits (56), Expect = 0.73
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = -3

Query: 178 KTDGNGLQSSHIXCLADGKPPPRLGCRH-----PVRSVPTFCKFYGCLSVK--FTSRRKN 20
           +TDGNG  SS    L    PP    CR+      ++    +CK+  C   K   T+ R+ 
Sbjct: 19  RTDGNGAASSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRACQCEKCCLTAERQR 78

Query: 19  IAGRQ 5
           +   Q
Sbjct: 79  VMALQ 83


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = -3

Query: 178 KTDGNGLQSSHIXCLADGKPPPRLGCRH-----PVRSVPTFCKFYGCLSVK--FTSRRKN 20
           +TDGNG  SS    L    PP    CR+      ++    +CK+  C   K   T+ R+ 
Sbjct: 19  RTDGNGASSSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRTCHCEKCCLTAERQR 78

Query: 19  IAGRQ 5
           +   Q
Sbjct: 79  VMALQ 83


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
 Frame = -3

Query: 178 KTDGNGLQSSHIXCLADGKPPPRLGCRH-----PVRSVPTFCKFYGCLSVK--FTSRRKN 20
           +TDGNG  SS    L    PP    CR+      ++    +CK+  C   K   T+ R+ 
Sbjct: 19  RTDGNGASSSCNNSLNPRTPPNCARCRNHGLKIGLKGHKRYCKYRTCHCEKCCLTAERQR 78

Query: 19  IAGRQ 5
           +   Q
Sbjct: 79  VMALQ 83


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 308 FHRTVLHLHHRDEQLSGH 255
           FH   L+++ RD+ LSGH
Sbjct: 103 FHDRGLYVNERDDPLSGH 120


>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +2

Query: 545 PPTFLDASQLATAILTSRYEFGSGKI-IYNKFKSVVSYAQS 664
           PP++ D  + A  +    Y FG  K+ +  K  S V ++ S
Sbjct: 3   PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +2

Query: 545 PPTFLDASQLATAILTSRYEFGSGKI-IYNKFKSVVSYAQS 664
           PP++ D  + A  +    Y FG  K+ +  K  S V ++ S
Sbjct: 3   PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = +2

Query: 545 PPTFLDASQLATAILTSRYEFGSGKI-IYNKFKSVVSYAQS 664
           PP++ D  + A  +    Y FG  K+ +  K  S V ++ S
Sbjct: 3   PPSYSDLGKQARDVFNKGYHFGLWKLDVKTKTNSGVEFSTS 43


>AJ618923-1|CAF02002.1|  155|Anopheles gambiae odorant-binding
           protein OBPjj5c protein.
          Length = 155

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -2

Query: 512 CAFRTIFAGYREIYLPHRSP*CSQHQVRRDGCGSLWIH 399
           C F  ++    +IY  +++  C Q  V  + C  L+ H
Sbjct: 114 CTFSIVYRDCPDIYWNYQNDRCGQFVVALNNCHYLFRH 151


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 121 PPPRLGCRHPVRSVPT 74
           PPP +G R P   VPT
Sbjct: 110 PPPMMGMRPPPMMVPT 125


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = -2

Query: 437 QVRRDGCGSLWIHQCVQLRTNLCQRS*QQTIA 342
           Q+ RD C   W H      T +C +   Q +A
Sbjct: 517 QIVRDTCEDCWDHDAEARLTAMCVQERLQEVA 548


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -3

Query: 571 LTCVQESRWETSDLISNTNDVLSVQSLQDTARFISH 464
           L C  E   E  +L    +D   +Q L+D   F+S+
Sbjct: 621 LNCPVELSIENHNLTVIASDGFGIQPLEDLGSFVSY 656


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,976
Number of Sequences: 2352
Number of extensions: 17265
Number of successful extensions: 91
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)