Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0516
(627 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 293 2e-78
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 242 4e-63
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 225 9e-58
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 204 2e-51
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 198 7e-50
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 197 2e-49
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 178 1e-43
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 171 1e-41
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 160 3e-38
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 159 4e-38
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 158 9e-38
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 152 8e-36
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 136 3e-31
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 133 3e-30
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 124 1e-27
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 124 2e-27
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 118 2e-25
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 115 8e-25
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 115 1e-24
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 112 8e-24
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 111 2e-23
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 110 3e-23
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 109 7e-23
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 107 3e-22
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 107 3e-22
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 104 2e-21
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 103 3e-21
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 101 2e-20
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 100 6e-20
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 93 5e-18
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 89 8e-17
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 87 3e-16
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 76 6e-13
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 75 1e-12
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 64 3e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 59 7e-08
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 54 3e-06
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 48 2e-04
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 48 2e-04
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 48 2e-04
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 48 2e-04
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 47 4e-04
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 46 6e-04
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 46 7e-04
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 46 0.001
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 44 0.002
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 44 0.002
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 43 0.005
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 40 0.037
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 40 0.037
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 40 0.049
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 40 0.065
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 39 0.11
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 38 0.15
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 38 0.15
UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1; Streptoc... 37 0.34
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 37 0.45
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 37 0.45
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 36 0.79
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 36 0.79
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 36 1.1
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 36 1.1
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 36 1.1
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 36 1.1
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 36 1.1
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 35 1.4
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 35 1.8
UniRef50_A5BWC6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.4
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 34 2.4
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 34 2.4
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 33 4.2
UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1; ... 33 4.2
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 33 4.2
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 7.4
UniRef50_Q5PA73 Cluster: 50S ribosomal protein L6; n=6; Anaplasm... 33 7.4
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 33 7.4
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 33 7.4
UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia bellii|... 32 9.8
UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1; ... 32 9.8
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 293 bits (720), Expect = 2e-78
Identities = 139/174 (79%), Positives = 155/174 (89%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKVEKWFG+KKELAAVRTVC
Sbjct: 13 PKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKELAAVRTVC 72
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
SH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYIRRV+MAPGVTV
Sbjct: 73 SHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVEMAPGVTV 132
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 569
VNS QKDELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV
Sbjct: 133 VNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 242 bits (593), Expect = 4e-63
Identities = 114/175 (65%), Positives = 142/175 (81%), Gaps = 2/175 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRT 221
P + + +K R V VKGPRG L+R+F H+ V++ ++ + L+V+KW+G++KELA VRT
Sbjct: 13 PENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNRKELATVRT 72
Query: 222 VCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGV 401
+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYIRRV+M PGV
Sbjct: 73 ICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGV 132
Query: 402 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 566
S QKDELI+EGN +E VS+SAALIQQ+TTVKNKDIRKFLDG+YVSEK TV
Sbjct: 133 ACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEKGTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 225 bits (549), Expect = 9e-58
Identities = 105/177 (59%), Positives = 137/177 (77%), Gaps = 1/177 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRTV 224
P G+TV V +++VTV+GPRG L RNFKHL +D +++ R L+V+ WFG+++ +AA+RT
Sbjct: 13 PEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRRTMAAIRTA 72
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
SHV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +R+V M GVT
Sbjct: 73 ISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRKVDMLEGVT 132
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 575
++ S K KDEL+++GN +E VS SAALI Q VKNKDIRKFLDG+YVS+K T+ D
Sbjct: 133 ILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKGTITED 189
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 204 bits (497), Expect = 2e-51
Identities = 89/170 (52%), Positives = 125/170 (73%)
Frame = +3
Query: 57 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 236
+TV VK R V V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 237 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNS 416
ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK +RR+++ G+T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 417 PKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 566
K KDE+++ GNSLE +S S A IQ + +K KD+RKFLDG+YVSE+ +
Sbjct: 154 EKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 198 bits (484), Expect = 7e-50
Identities = 96/173 (55%), Positives = 126/173 (72%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+TV +K+R VTV GPRG LK+N +H+ ++++ +K W GS+K A +R+V
Sbjct: 14 PKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGSRKHNACIRSVY 72
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ R +K PGVTV
Sbjct: 73 SIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKCLPGVTV 132
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 566
S KDE+I+EGNSLE+VS SAA I+Q V+NKDIRKFLDG+YVSE+ +
Sbjct: 133 SISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 197 bits (480), Expect = 2e-49
Identities = 99/178 (55%), Positives = 126/178 (70%), Gaps = 2/178 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+TV +KSR+V V GPRG L +N KH+ V VN +L+KV G +K +AA+RTV
Sbjct: 13 PEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAALRTVK 72
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPI--NCVTTEGNSIIEIRNFLGEKYIRRVKMAPGV 401
S V+NMI GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+K IR V + GV
Sbjct: 73 SLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVPVRDGV 132
Query: 402 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 575
T+ S KDE+++ GNS+EDVS +AA +QQ V+NKDIRKFLDG+YVS K + D
Sbjct: 133 TIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHKGFITED 190
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 178 bits (433), Expect = 1e-43
Identities = 88/178 (49%), Positives = 111/178 (62%)
Frame = +3
Query: 24 CSKS*SQNPNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 203
CS + P + + R+VTVKG +G L R+F H +DI N + V WF K
Sbjct: 4 CSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKR 62
Query: 204 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRV 383
A RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+ + RR+
Sbjct: 63 NALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRI 122
Query: 384 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+ PGVT+ S KDELI+ G S+EDVS +AA I +S V NKD+RKFLDG YVS +
Sbjct: 123 ECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 171 bits (416), Expect = 1e-41
Identities = 84/185 (45%), Positives = 120/185 (64%), Gaps = 9/185 (4%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKWFGSKK 200
P G+ + + + + V GPRG L R F+H VDI + P+ ++ ++ W+G+++
Sbjct: 14 PEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMWYGNRR 73
Query: 201 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 380
+ A VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGEK R
Sbjct: 74 DSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGEKRTRH 133
Query: 381 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKT 560
++M GV V KDE+ +EGN +E VS SAA I + V+NKDIR+FLDG+YVSEK
Sbjct: 134 IEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVYVSEKC 191
Query: 561 TVVLD 575
+ D
Sbjct: 192 LIEND 196
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 160 bits (388), Expect = 3e-38
Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 3/157 (1%)
Frame = +3
Query: 108 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 278
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 279 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNSL 458
MRAVYAHFPIN + EIRNFLGEK +R + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 459 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVV 569
+ VS SAAL+ +T V+NKDIRKFLDG+Y + K TVV
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 159 bits (387), Expect = 4e-38
Identities = 83/180 (46%), Positives = 116/180 (64%), Gaps = 10/180 (5%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM---VNPR------LLKVEKWFGSKK 200
P + + KS++V VKGPRG L +NF+H A+DI++ VN + + V W +K
Sbjct: 13 PEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSVRMWQSYRK 72
Query: 201 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRR 380
+ V +V S + NMI+GVT G+++KM YAHFPI +EI+NFLGEK IR
Sbjct: 73 QRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNFLGEKIIRT 132
Query: 381 VKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+K PGVT+ N ++K+ L ++GN L +VS + ALI Q+ VKNKDIR+FLDG+YVSEK
Sbjct: 133 IKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFLDGIYVSEK 192
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 158 bits (384), Expect = 9e-38
Identities = 69/114 (60%), Positives = 90/114 (78%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P+G+T VK+R+V V GPRG LKR+F+HL +++ V L+V KWFG +KE+AA+RTVC
Sbjct: 13 PDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEIAAIRTVC 72
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKM 389
SH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK +R V +
Sbjct: 73 SHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVPL 126
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 152 bits (368), Expect = 8e-36
Identities = 73/171 (42%), Positives = 108/171 (63%), Gaps = 1/171 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTV 224
P + + K+R ++ G G + R+F+ + IR + + + W KK+LA + T+
Sbjct: 13 PKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLAKLNTI 72
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK IR++ M GV
Sbjct: 73 ASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYMGQGVK 132
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+ + +KDE+ + G+ L VS +AA IQQS KNKD+RKFLDG+Y+ K
Sbjct: 133 IKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIYIIMK 183
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 136 bits (330), Expect = 3e-31
Identities = 74/170 (43%), Positives = 109/170 (64%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+ V V+ V VKGP+G L+R K+ V I + +++ + K F KK++A VRT
Sbjct: 14 PEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAIVRTFK 72
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
+H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK RR K+ PGVTV
Sbjct: 73 AHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKILPGVTV 130
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+ E+ +EG E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 131 ---KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 133 bits (322), Expect = 3e-30
Identities = 74/170 (43%), Positives = 107/170 (62%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+ V V+ V VKGP+G L+R F + I + ++ + K F +K++A RT
Sbjct: 14 PEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAIARTFA 72
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
+H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK R+ K+ PGVTV
Sbjct: 73 AHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKILPGVTV 130
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+ E+I+EG E V +AA I+Q+T + D R F DG+Y+ EK
Sbjct: 131 ---KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 124 bits (300), Expect = 1e-27
Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 2/172 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKKELAAVRT 221
P T + ++ T +GP+G +++ +H L DI N +++ W G +K +A T
Sbjct: 33 PEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLWNGKRKAMALAIT 89
Query: 222 VCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGV 401
V S + N IK VT GF Y M+AVY HF IN E I+ ++NFLGEK ++R +M G
Sbjct: 90 VESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKNVKRFRMR-GA 148
Query: 402 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
V ++KD ++IEG SL DVS SA I KN+D R FLDG++V+E+
Sbjct: 149 ARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVFLDGIFVTER 200
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 124 bits (298), Expect = 2e-27
Identities = 68/123 (55%), Positives = 85/123 (69%)
Frame = +3
Query: 198 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIR 377
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 378 RVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+M GV S QKDELI+EGN E VS+SAALIQ++T V+N+DIRKF+DG+YVSEK
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 558 TTV 566
T+
Sbjct: 128 GTM 130
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 118 bits (283), Expect = 2e-25
Identities = 69/175 (39%), Positives = 97/175 (55%), Gaps = 8/175 (4%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVK--GPR----GVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKEL 206
P + VKS +VT++ P+ L ++ HL +D N + WFG++K L
Sbjct: 14 PENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIVARCWFGNRKLL 73
Query: 207 AAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVK 386
A + T+ V+NMI GVT G++YKM VY+HFPI +E + F+G K + V
Sbjct: 74 ARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKIVT 133
Query: 387 MAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 548
GV + N KDE+ IEG +LEDVS I Q T +K+KD+RKFLDG+YV
Sbjct: 134 APEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDGIYV 188
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 115 bits (277), Expect = 8e-25
Identities = 58/106 (54%), Positives = 72/106 (67%), Gaps = 3/106 (2%)
Frame = +3
Query: 51 NGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKELAAVRT 221
+G TV V KSR + V G G L+R F+H+ VD+++V R + VE WFG K A +RT
Sbjct: 74 DGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNKACIRT 133
Query: 222 VCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 359
VCSH+ENMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 134 VCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 115 bits (276), Expect = 1e-24
Identities = 66/170 (38%), Positives = 101/170 (59%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+ V + ++TV GP+G L R+ + +D+ MV + V K+ LA T+
Sbjct: 10 PPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAMTGTLE 68
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
+H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK R K+ GVTV
Sbjct: 69 AHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKIIEGVTV 126
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
DE+ I G E V ++AA I+ +T + +D R F DG+Y++E+
Sbjct: 127 KIG---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 112 bits (269), Expect = 8e-24
Identities = 65/170 (38%), Positives = 102/170 (60%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V T
Sbjct: 12 PEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVGTFA 70
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
SH++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK R K+ G T
Sbjct: 71 SHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-GETK 127
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
V +E+++ G + EDV +AA I+Q T +K D R F DG+Y+ +K
Sbjct: 128 VK--VSGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 111 bits (266), Expect = 2e-23
Identities = 57/179 (31%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Frame = +3
Query: 42 QNPNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVR 218
Q P+ + V +++ ++ VKGP+G + ++F + A IR+ +N + +E F +++ A +
Sbjct: 14 QIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKALLY 72
Query: 219 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 398
++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK IRR K+ PG
Sbjct: 73 SIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEKNIRRAKILPG 130
Query: 399 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVLD 575
V V + +++++EG+ + +V+ +AA I+ ST + D R F DG+Y+ +K + L+
Sbjct: 131 VKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIGLE 186
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 110 bits (264), Expect = 3e-23
Identities = 64/157 (40%), Positives = 98/157 (62%), Gaps = 1/157 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWFGSKKELAAVRTV 224
P G+ VHV + V V+GP G ++++F H + IR V + VE + +KK+ A V T+
Sbjct: 13 PEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYALVGTI 71
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
S + NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ R + PG
Sbjct: 72 ASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGIMPGAK 129
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 515
V +KD++I+EG L+ V+ +AA I +T ++ K
Sbjct: 130 V---KIEKDDVIVEGIDLDAVAQTAANIHLATHLRGK 163
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 109 bits (261), Expect = 7e-23
Identities = 65/161 (40%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Frame = +3
Query: 78 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKG 254
R++ VKG G ++F+ + V IR+ + LK E K++LA + T S V N+ +G
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEG 65
Query: 255 VTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDE 434
V G+ K++ VYAHFPI + +G I+ + NF GE+ R+ K+ G VV+ + ++
Sbjct: 66 VGVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGED 120
Query: 435 LIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+I+ G+ L DVS +AA ++Q T VKNKD R FLDG+YV EK
Sbjct: 121 VIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 107 bits (256), Expect = 3e-22
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 2/172 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKWFGSKKELAAVRT 221
P + + +K + + KG G L + F + V+I + + L V ++ +K A VRT
Sbjct: 13 PKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAIVRT 72
Query: 222 VCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGV 401
+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G K I + V
Sbjct: 73 ITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIPSSV 132
Query: 402 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
V + K E+I+ +E + ++LIQ ++ NKD R F+DG+Y++ K
Sbjct: 133 QVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 107 bits (256), Expect = 3e-22
Identities = 60/154 (38%), Positives = 91/154 (59%)
Frame = +3
Query: 96 GPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 275
GP+G R K+ V I + + ++ +V KK A V T H+EN+I GV +GF+Y
Sbjct: 48 GPKGENTRYLKYRGVFIEVGDGKV-RVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEY 106
Query: 276 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELIIEGNS 455
++ VYAHFPI V EGN +I I NF+GEK+ RR K+ V S + ++ + G
Sbjct: 107 HLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGID 161
Query: 456 LEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+E+ +AA ++Q+T +K KD R F DG+Y+ +K
Sbjct: 162 IEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 104 bits (250), Expect = 2e-21
Identities = 60/170 (35%), Positives = 99/170 (58%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+TV ++ +GP G +NF+++ V I + + ++ ++ K++ A + T
Sbjct: 16 PEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAILHTAR 74
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ R + V
Sbjct: 75 SIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMGNTKV 132
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+ PK +D +++ G D++ +AA I+ +T VKNKD R FLDG+YV EK
Sbjct: 133 I--PKGED-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 103 bits (248), Expect = 3e-21
Identities = 58/175 (33%), Positives = 99/175 (56%), Gaps = 5/175 (2%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P + V ++ ++ V GP+G ++R F H + + VN + +E +F +++E + T
Sbjct: 13 PENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFATRREKRLINTWR 71
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIRRVKMAPGV 401
SH++NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK I+ + V
Sbjct: 72 SHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIKELPYLDKV 129
Query: 402 TV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV--KNKDIRKFLDGLYVSEK 557
V + K + E+++E E A++I+QST K KD R+F DG+++ K
Sbjct: 130 KVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWLYYK 184
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 101 bits (241), Expect = 2e-20
Identities = 58/158 (36%), Positives = 92/158 (58%)
Frame = +3
Query: 84 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 263
+TV+G G + R + +D+ V+ + +E + K ++ + T SH+ENM GVT+
Sbjct: 21 ITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTIGTFQSHIENMFHGVTE 79
Query: 264 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSPKQKDELII 443
G++Y M Y+HFP+ V EG+ ++ I NFLGEK RR + G T V +EL +
Sbjct: 80 GWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-HGDTDVEI--DGEELTV 134
Query: 444 EGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
G +E V +AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 135 SGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 99.5 bits (237), Expect = 6e-20
Identities = 61/172 (35%), Positives = 91/172 (52%), Gaps = 2/172 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+T V VTV L R F+H +++R + L +V KKE A T
Sbjct: 14 PEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALAGTWA 72
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP--GV 401
+H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + RV P
Sbjct: 73 AHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-VPRVAALPWSPA 129
Query: 402 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
V + K ++ + G E V +AA I++S +KN+D R F DG+Y+ K
Sbjct: 130 EVEVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 93.1 bits (221), Expect = 5e-18
Identities = 52/159 (32%), Positives = 93/159 (58%), Gaps = 1/159 (0%)
Frame = +3
Query: 84 VTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTK 263
VTVKGP+G + + F + V + + + ++ + ++++ A + + +++ENM KGVT+
Sbjct: 43 VTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAATRSNRRQKAILGMIKAYIENMQKGVTE 101
Query: 264 GFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA-PGVTVVNSPKQKDELI 440
G +YK++ VY+HFP + + I NF+GE R ++ P T V Q ++I
Sbjct: 102 GHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGENVPRVAEIVDPENTEV--IVQGQDII 159
Query: 441 IEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+ G E V +AA ++Q+T +K++D R F DG+Y+ EK
Sbjct: 160 VRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIVEK 198
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 89.0 bits (211), Expect = 8e-17
Identities = 54/170 (31%), Positives = 95/170 (55%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P + V + ++++ L++ F V + +V +K+ K + +E V T
Sbjct: 13 PKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVGTWA 71
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ R ++ G T
Sbjct: 72 SEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-GETQ 128
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
V+ + D L + G S +DV +AA I+++T +K D R F DG+Y+ K
Sbjct: 129 VS--VKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLISK 176
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 87.0 bits (206), Expect = 3e-16
Identities = 53/156 (33%), Positives = 92/156 (58%), Gaps = 5/156 (3%)
Frame = +3
Query: 48 PNGLTVHVKSR-----LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 212
P G++V ++ +V VKGP G + + FK+ V + + + +++ +E + K+E A
Sbjct: 13 PKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARKREYAI 71
Query: 213 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 392
+ T ++NM GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K + +
Sbjct: 72 LGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKITLNIP 129
Query: 393 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQST 500
GV V K K++++IEG E VS+ AA +Q +T
Sbjct: 130 KGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAAT 163
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 76.2 bits (179), Expect = 6e-13
Identities = 49/167 (29%), Positives = 86/167 (51%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P+ + +++ + +KG G R F+ V + +K+ +K V T
Sbjct: 13 PDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNKYTKGIVGTWY 71
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK R K+ G V
Sbjct: 72 SETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPRSAKIVDGCKV 129
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 548
+ D + I G + +AA I+++T +++ D R F DG+++
Sbjct: 130 ---SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKWFGSKKELAAVRT 221
P + + +K R V VKGP+G L R+F H+ V++ ++ +L K V+KW+G++KELA V T
Sbjct: 13 PANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNRKELATVHT 72
Query: 222 VCSHVENMIKGVTKG 266
+CS V+N IK VT G
Sbjct: 73 ICSPVQNTIKWVTLG 87
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 64.1 bits (149), Expect = 3e-09
Identities = 44/112 (39%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = -2
Query: 569 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQRVAFND*FILLFWRVNDSHTRC 390
+N R I TIQE +DIL+ D + LLN SS R+ FQ V N+ FILL R T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 389 HLYPSDVFLTQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 240
S+ F TQE++ N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 59.3 bits (137), Expect = 7e-08
Identities = 28/71 (39%), Positives = 44/71 (61%)
Frame = +3
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI RV++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 408 VNSPKQKDELI 440
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Frame = +3
Query: 75 SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKELAAVRTVCSHVENMI 248
+ +V VK RG L+R+F H+ +++R++ R L+V+KW + K LA T+ SHV+NMI
Sbjct: 16 AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK-LATAHTIYSHVQNMI 74
Query: 249 KGV 257
K V
Sbjct: 75 KRV 77
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 48.0 bits (109), Expect = 2e-04
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Frame = +3
Query: 48 PNGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTV 224
P+ +TV + + V VKGP+G L R F H ++I+ V +L V + K+ A T
Sbjct: 12 PSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKEHRALHGTT 69
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
S + NM++GV+KGF+ + V + + GN ++ L Y V++ P
Sbjct: 70 RSLLGNMVEGVSKGFERGLELVGVGYR---ASKSGNKLV-----LNVGYSHPVEIVPEEG 121
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQ 491
+ + +++++G E V + AA I+
Sbjct: 122 IEIEVPSQTKVVVKGTDKERVGAIAANIR 150
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 47.6 bits (108), Expect = 2e-04
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWFGSKKELAA 212
P+G+ + V + + +KG G L N ++L VD R N ++K V K +K L A
Sbjct: 14 PDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRSSDEKRLKA 72
Query: 213 VR-TVCSHVENMIKGVTKGFQYKM 281
+R T SHV NMIKGVT+G++ ++
Sbjct: 73 LRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 47.6 bits (108), Expect = 2e-04
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Frame = +3
Query: 78 RLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 257
+L+ + GPRG+L RNFKH ++DI+ V+K KE+ + + +++++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQ--------VQKEI---KEIKQIGLIKIEYQDVVQYS 101
Query: 258 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTVVNSP-KQKDE 434
+ FQ K A +I+N IR + GV + ++K+
Sbjct: 102 KQRFQVKSIAA-----------------QIKNM-----IRGI--TSGVVITRKEAEEKNV 137
Query: 435 LIIEGNSLEDVSSSAALIQQSTTVKNKDIR 524
LI+ N L +VS + ALI Q+ VKNKDIR
Sbjct: 138 LILSANDLNNVSLTCALIHQACAVKNKDIR 167
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 47.6 bits (108), Expect = 2e-04
Identities = 41/150 (27%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Frame = +3
Query: 48 PNGLTVHVK-SRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTV 224
P G+ V V +VTVKG +G L++ F + V+I + + ++ K K+E A T
Sbjct: 12 PKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMHGTT 69
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
+ + NM+KGVT+GF+ + V + +G + I N +G + ++ PG+
Sbjct: 70 RAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEPGIE 123
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQQ 494
++ + + +I+ G E V AA I++
Sbjct: 124 II--VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 46.8 bits (106), Expect = 4e-04
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKKELAAVRTV 224
P+G+ V + +L++VKGP+G L+ H +V++ +V L+ G ++ A T
Sbjct: 12 PSGVEVKLVGQLLSVKGPKGTLELII-HSSVEVEIVEEAGELRFAARNGDQQTRAMAGTT 70
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
+ V NM++GV++GF+ K++ V + T N LG + ++ G+T
Sbjct: 71 RALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLA------LGFSHPVDYELPNGIT 124
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQ 491
+P Q D ++I G + V AA I+
Sbjct: 125 -AETPSQTD-ILIRGIDKQLVGQVAAEIR 151
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 46.4 bits (105), Expect = 6e-04
Identities = 44/149 (29%), Positives = 71/149 (47%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+ V+V + +TVKG G L R H AV + + L + S A T
Sbjct: 13 PTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGSNALAGTAR 70
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
+ + NM++GV GFQ K+ V + EG ++ +G + ++M G+T
Sbjct: 71 AVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNIEMPEGIT- 123
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQ 494
V +P Q E+I++G + VS AA I++
Sbjct: 124 VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/81 (33%), Positives = 43/81 (53%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+ + + + VTVKGP+G L R H + I + +L VE+ K+ A T
Sbjct: 12 PEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEHRALHGTTR 69
Query: 228 SHVENMIKGVTKGFQYKMRAV 290
S + NM+ GV+KGF+ + +
Sbjct: 70 SLINNMVIGVSKGFEKSLEII 90
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 45.6 bits (103), Expect = 0.001
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKKELAAVRTV 224
PN + V + ++ +KGP G L + + DI ++ N + V++ KK A
Sbjct: 20 PNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKKNRALHGLY 76
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
+ NMIKGV+ GF+ K+ + F N + N I+ + +G + +K+ +T
Sbjct: 77 RMLIYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIMIKLPQSIT 133
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQ 491
+ + ++I++ + + AA I+
Sbjct: 134 LEVKMDKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 44.4 bits (100), Expect = 0.002
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKH--LAVDIRMVNPRLLKVEKWFGSKKELAAVRT 221
P G +V + R++TV+G R R+ H L +D+ + RL ++ +++
Sbjct: 13 PEGCSVEILERVMTVRGKRATAVRDLSHFVLTMDVHEGHVRL----RYGMAQQGAQQADY 68
Query: 222 VCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGV 401
VC +N I G G++Y +R + F +G +++ ++NFL + K A +
Sbjct: 69 VCICDQNCIVGCMSGYEYTLRLCTSTFNERSDRDDGKTVV-VKNFLDRSMLGDTKCAETL 127
Query: 402 TVVNSPKQ 425
++P++
Sbjct: 128 LRGSAPRK 135
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P+ + + VK LV V+G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 12 PDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHGLYR 69
Query: 228 SHVENMIKGVTKGF 269
S + NM+KGVT+GF
Sbjct: 70 SLIFNMVKGVTEGF 83
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWFGSKKELAA 212
P G+TV +K +V VKGP+G L + F ++ +++ V P ++ + +K
Sbjct: 12 PQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKSDWRKVKMF 71
Query: 213 VRTVCSHVENMIKGVTKGFQYKMRAV 290
T S + NM+ GVT+G++ ++ V
Sbjct: 72 QGTYWSLIRNMVVGVTEGYKKELEIV 97
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 40.3 bits (90), Expect = 0.037
Identities = 33/149 (22%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P + + + + + VKGP+G L R+ L + ++ N ++L V + + + +C
Sbjct: 12 PAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRPARQLHGLC 68
Query: 228 -SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
+ V NM+ GV+KGF+ ++ V + +G+ + + N +G + + PG+
Sbjct: 69 RTLVANMVDGVSKGFERRLELVGVGYR---AAIQGSKL--VLN-VGYSHPVEIPFPPGIQ 122
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQ 491
+ + + + +++ G E V ++AA I+
Sbjct: 123 I--AVEGNNIIVVSGTDKELVGNTAARIR 149
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 40.3 bits (90), Expect = 0.037
Identities = 39/137 (28%), Positives = 73/137 (53%), Gaps = 5/137 (3%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELAAVR 218
P G+TV +K +VTVKGP+G L + + + A+++ + + + E + + K+ A
Sbjct: 12 PAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKHAFH 70
Query: 219 TVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAP 395
+ S V NM+ GV++G++ ++ V + + +GN IIE+ LG + +++
Sbjct: 71 GLYRSLVHNMVVGVSEGYKKELELVGVGYR---ASNQGN-IIELA--LGYTHNIFIQLPA 124
Query: 396 GVTV-VNSPKQKDELII 443
V V S + K+ LII
Sbjct: 125 EVKVETKSERNKNPLII 141
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 39.9 bits (89), Expect = 0.049
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P+ ++V + VTVKGP+G LKR V + V+ ++ K++ +C
Sbjct: 12 PDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQSRERHGLC 68
Query: 228 -SHVENMIKGVTKGFQYKMRAV 290
+ V NMI+GV+KG+ K+ V
Sbjct: 69 RTLVANMIEGVSKGYSKKLEIV 90
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 39.5 bits (88), Expect = 0.065
Identities = 23/81 (28%), Positives = 41/81 (50%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
PN + + ++ + V G G L F H + ++ N + L V + + A + T C
Sbjct: 14 PNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRYRNHVNRALLGTTC 72
Query: 228 SHVENMIKGVTKGFQYKMRAV 290
S + +MI GVT+GF K++ +
Sbjct: 73 SLINSMIVGVTEGFVKKLQLI 93
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 38.7 bits (86), Expect = 0.11
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKKELAAVRTV 224
P + +++K+ LV +KG GVL N L A+++ + ++ + +K+ ++
Sbjct: 12 PKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANEEKHTKQLHGTTNSI 71
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
+ENMI GV+KGF+ ++ + + S IEI G ++ V + P
Sbjct: 72 ---IENMIIGVSKGFKKELEIK----GVGYKSALKGSQIEIA--AGYSHLVYVNV-PKEL 121
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQQSTT 503
V PK ++II G + V AA+I++ T
Sbjct: 122 KVEIPK-PTQIIISGIDNQKVGELAAVIRKVRT 153
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 38.3 bits (85), Expect = 0.15
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 48 PNGLTVHVKSR-LVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR-T 221
PN + V +K R ++V+GP+G L+ F H + + N + K + + + T
Sbjct: 12 PNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEIFMKKIHGT 68
Query: 222 VCSHVENMIKGVTKGFQYKMRAV 290
+ + NM++GV+KGFQ ++ V
Sbjct: 69 TRALLSNMVEGVSKGFQKTLKIV 91
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 38.3 bits (85), Expect = 0.15
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 72 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 248
K VTV+GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 249 KGVTKGF 269
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_A5LSZ6 Cluster: 50S ribosomal protein L6; n=1;
Streptococcus pneumoniae SP9-BS68|Rep: 50S ribosomal
protein L6 - Streptococcus pneumoniae SP9-BS68
Length = 139
Score = 37.1 bits (82), Expect = 0.34
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+ + +VTVKGP+G L R F ++IR V + + + SK+ T
Sbjct: 12 PAGVELANNDNVVTVKGPKGELTREFSK-DIEIR-VEGTEITLHRPNDSKEMKTIHGTTR 69
Query: 228 SHVENMIKGVTKGF--QYKMRAV 290
+ + NM+ GV++GF + +MR V
Sbjct: 70 ALLNNMVVGVSEGFKKELEMRGV 92
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 36.7 bits (81), Expect = 0.45
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 1/149 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P+ + V + VTVKGP+G LKR V + V+ ++ +K+ +C
Sbjct: 12 PDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRSSRERHGLC 68
Query: 228 -SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
+ V NM+ GV++G+ K+ V + +G +++ + Y V++ P
Sbjct: 69 RTLVANMVIGVSQGYSKKLEIVGVG---SRAQVKGKTLV-----VSAGYSHPVEVVPPEG 120
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQ 491
+ + + + + G E V + AA I+
Sbjct: 121 ITFTVENNTNVTVSGTDKELVGNEAAKIR 149
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 36.7 bits (81), Expect = 0.45
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKKELAAVRTV 224
P G+ V + V + GP+G L + FK ++A+ ++ L V+ +K A T
Sbjct: 12 PEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKNARAMWGTA 68
Query: 225 CSHVENMIKGVTKGFQYKM 281
S + NMI GV +GF+ K+
Sbjct: 69 RSIICNMITGVKEGFKLKL 87
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 35.9 bits (79), Expect = 0.79
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +3
Query: 42 QNPNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRT 221
Q P+G V + VKG G L R F V+I+ N ++ VE+ K T
Sbjct: 10 QIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQI-SVERLNELKPTKQLHGT 67
Query: 222 VCSHVENMIKGVTKGFQYKMR 284
+ + NM+KGV++GF+ +++
Sbjct: 68 TNALIANMVKGVSEGFKKELK 88
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 35.9 bits (79), Expect = 0.79
Identities = 24/81 (29%), Positives = 39/81 (48%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P+G+ V + + VTVKGP+G L V+++ LL + +K+
Sbjct: 12 PSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRAKGMWGLSR 69
Query: 228 SHVENMIKGVTKGFQYKMRAV 290
+ V NM+ GVT GF+ + V
Sbjct: 70 TLVANMVHGVTVGFEESLELV 90
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 35.5 bits (78), Expect = 1.1
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV-RTV 224
P +T ++ + + VKGP+G L R + + + L+K ++L + RT+
Sbjct: 12 PPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQLHGLSRTL 71
Query: 225 CSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
V NM+ GV+KGF+ ++ + +G ++I L Y + V+M P
Sbjct: 72 ---VANMVDGVSKGFEKRLEIQGVGYR---AQVQGKNLI-----LNVGYSKPVEMNPPQG 120
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQ 491
+ + + +II G E V + AA I+
Sbjct: 121 ITVAVENNTNVIISGIDKEVVGNIAAQIR 149
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 35.5 bits (78), Expect = 1.1
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P+G+TV+ + + VKGP+G L + + + +R +LL VE+ ++K A
Sbjct: 12 PSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKHRALHGLTR 69
Query: 228 SHVENMIKGVTKGF 269
+ V N +KGV+ G+
Sbjct: 70 TLVANAVKGVSDGY 83
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 35.5 bits (78), Expect = 1.1
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 1/149 (0%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P G+ V + VTVKGP+G L R+F+ V I L+ G+ K + +
Sbjct: 12 PPGIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKATRSFFGLS 68
Query: 228 -SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVT 404
+ ++NMI GV GF + V + +G+ ++ + V +AP
Sbjct: 69 RTLLDNMIVGVKDGFDKNLEIVGVGMRAD---KDGDKVV-----FKVGFSHSVTVAPPAG 120
Query: 405 VVNSPKQKDELIIEGNSLEDVSSSAALIQ 491
+ S ++ + G + EDV AA I+
Sbjct: 121 ITLSVDGTTKVKVSGINKEDVGQMAAEIR 149
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 72 KSRLVTVKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 248
K + V+GP+G L+ N H + + + R +K+++ A T+ + V+NMI
Sbjct: 22 KEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDRSFHKAIHGTMAALVKNMI 80
Query: 249 KGVTKGF 269
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/149 (20%), Positives = 67/149 (44%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P+ +T+ ++ + + VKGP G L + V++ L+V+K +++
Sbjct: 54 PSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRANQMHGLFR 112
Query: 228 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
+ +NM+ GV+KGF+ K+ V + T +G ++ L + VKM ++
Sbjct: 113 TLTDNMVVGVSKGFEKKLILVGVGYR---ATVDGKELV-----LNLGFSHPVKMQIPDSL 164
Query: 408 VNSPKQKDELIIEGNSLEDVSSSAALIQQ 494
++ + + G ++ AA +++
Sbjct: 165 KVKVEENTRITVSGYDKSEIGQFAATVRK 193
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 35.1 bits (77), Expect = 1.4
Identities = 24/73 (32%), Positives = 35/73 (47%)
Frame = +3
Query: 63 VHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVEN 242
V VK ++ V GP+G L + I V + V++ SK+ A V N
Sbjct: 17 VEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRARAMHGLYRMLVSN 74
Query: 243 MIKGVTKGFQYKM 281
M++GVTKGF K+
Sbjct: 75 MVEGVTKGFTRKL 87
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 34.7 bits (76), Expect = 1.8
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P L+ + +TV GP+G L R +++ ++N + K G K + + +
Sbjct: 12 PTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILNDTI--AVKTSGQTKMASQLHGLS 68
Query: 228 -SHVENMIKGVTKGFQYKMR 284
+ + NMI+GV+ GF K++
Sbjct: 69 RTLISNMIEGVSNGFFKKLQ 88
>UniRef50_A5BWC6 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 267
Score = 34.3 bits (75), Expect = 2.4
Identities = 31/132 (23%), Positives = 54/132 (40%)
Frame = -2
Query: 410 NDSHTRCHLYPSDVFLTQEVTYLNN*ITLSGDTVNGEVSIHSTHLVLEAFSYSFNHVLYM 231
N TRC L + + + + L+ ++ V+I H ++ + +L +
Sbjct: 137 NYRSTRCILEAASSLIQNNMKRCQSKKVLTDNSTGSRVTIKECHSEEAQCAFVVDKILEI 196
Query: 230 *TDCPHGGKLLFGSEPFLNLQETRVYHANVNSQVFEVPFENSAGPFNCHQTRFHMDRKPV 51
+D K FGS L Y V+ +VF+ F + PFN H F+ +K +
Sbjct: 197 TSD-DSVAKYSFGSVAIL-------YRRQVSGKVFQTAFRDRKIPFNIHGVAFYR-KKVI 247
Query: 50 GILTL*FATICF 15
IL L F + +
Sbjct: 248 NILILQFTKMLY 259
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 34.3 bits (75), Expect = 2.4
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 250 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLTVTRR 77
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 76 DFT 68
F+
Sbjct: 82 CFS 84
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 34.3 bits (75), Expect = 2.4
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVC 227
P +T+ + + VTVKGP+G L R F ++ +V V K + +C
Sbjct: 12 PKNVTLTLDGQQVTVKGPKGQLSRVF---PPEVNVVQEGEAIVVKRRDDSRPAKERHGLC 68
Query: 228 -SHVENMIKGVTKGFQYKM 281
+ + NM++GV++GF K+
Sbjct: 69 RTLLANMVEGVSQGFTKKL 87
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.5 bits (73), Expect = 4.2
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 450 NSLEDVSSSAALIQQSTTVKNKDIRKFLDG 539
NS++ +SSSA+L+QQS K+ + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_Q966K1 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 113
Score = 33.5 bits (73), Expect = 4.2
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -2
Query: 569 HNSCFLRYIKTIQELSDILILDCSRLLNESSRARDIFQR 453
+N+C LR IK + L+ +L + SRL N SR RD+F++
Sbjct: 25 NNNCKLRQIKPVPNLTRLL--EESRLTNSLSRLRDVFKK 61
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 33.5 bits (73), Expect = 4.2
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Frame = +3
Query: 48 PNGLTVHVKSRLVTVKGPRGVLKRNFKH-----LAVDIRMVNPRLLKVEKWFGSKKELAA 212
P+G+TV + R + V+GP+G K +FKH +AVD N ++ + +E
Sbjct: 12 PSGVTVSIADRNIDVEGPKG--KLSFKHRPEVKVAVD-SDTNQVIVSRDGDDRPSREFHG 68
Query: 213 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMA 392
+ V NM+ GV G++ K+ V + + + +++R + R++
Sbjct: 69 LTRAI--VANMLVGVKDGYEKKLEIV----GVGYLASISGDTLQLRVGYANELHRKI--- 119
Query: 393 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 491
P V P Q ++I+G + V AA I+
Sbjct: 120 PTDLTVTCPDQ-THVVIQGCDKQSVGQFAAEIR 151
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 32.7 bits (71), Expect = 7.4
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 120 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAH 299
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 300 FPINCVTTEGNSIIE 344
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_Q5PA73 Cluster: 50S ribosomal protein L6; n=6;
Anaplasmataceae|Rep: 50S ribosomal protein L6 -
Anaplasma marginale (strain St. Maries)
Length = 181
Score = 32.7 bits (71), Expect = 7.4
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Frame = +3
Query: 48 PNGLTVHV-KSRLVTVKGPRGVLKRNFKHLAVDIRMV--NPRLLKVEKWFGSKKELAAVR 218
P G+ V V VTV G G +F L IR V LL V + S +
Sbjct: 12 PEGVKVDVCDGNSVTVIGKDGT-SSSFS-LCHGIRAVLDGSTLLLVNERQSSPRAKVMWG 69
Query: 219 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIRRVKMAPG 398
+ S + N IKG++KGF ++ + + C GN + + F+G + R + G
Sbjct: 70 SYRSGISNAIKGLSKGFSVELEVNGVGYRVVC----GNKYLSM--FVGFSHGVRYVIPEG 123
Query: 399 VTVVNSPKQKDELIIEGN---SLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEK 557
+ + PK +L+I+G+ + V++ I++ K K I F+ G YV K
Sbjct: 124 IE-IKCPK-PTQLVIKGSDKVKVHMVAADICSIRRYDPYKGKGI--FVKGEYVYRK 175
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 32.7 bits (71), Expect = 7.4
Identities = 23/73 (31%), Positives = 38/73 (52%)
Frame = +3
Query: 54 GLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSH 233
G+ V V + +T+KG +G L R AV +++ + ++ G K A T ++
Sbjct: 14 GVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDAWAQAGTARAN 71
Query: 234 VENMIKGVTKGFQ 272
V NM+ GVT GF+
Sbjct: 72 VNNMMIGVTTGFK 84
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 32.7 bits (71), Expect = 7.4
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 402 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 527
TVV P + ++ G+S+ED + + +++TT KDI K
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDIIK 117
>UniRef50_Q1RK02 Cluster: Ankyrin repeat; n=2; Rickettsia
bellii|Rep: Ankyrin repeat - Rickettsia bellii (strain
RML369-C)
Length = 629
Score = 32.3 bits (70), Expect = 9.8
Identities = 17/90 (18%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Frame = +3
Query: 141 DIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI-NCV 317
D R L+K + KK++ A + CS ++N + + + K+R + +PI
Sbjct: 508 DRRKAVESLVKYDNDLNKKKDITATLSYCSAIDNSFRAIDRNNLSKLRVLLDVYPILQEK 567
Query: 318 TTEGNSIIEIRNFLGEKYIRRVKMAPGVTV 407
+G++++ + Y+ + + G+ +
Sbjct: 568 NNKGDTLLTAAVYKDNYYLAKYLVIRGIKI 597
>UniRef50_A7TES6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 206
Score = 32.3 bits (70), Expect = 9.8
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 384 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTT 563
K A G +V + ++KDE++I+G+ LE+V + + +KN + + +D +K T
Sbjct: 134 KFATGCSVSKNAEKKDEIVIQGDVLEEVEKYIHSLLEEKGLKNVKL-EIIDSQKKKKKPT 192
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,022,179
Number of Sequences: 1657284
Number of extensions: 11690344
Number of successful extensions: 28646
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 27836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28582
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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