Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0515
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    25   0.75 
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   1.7  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   4.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   4.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   4.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.3  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.0  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 467 LQAKVDPARVPE 502
           LQAKVDP ++PE
Sbjct: 256 LQAKVDPLKIPE 267


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
 Frame = -2

Query: 400 PW---YSWRPWVTTHHQVDRVLMGRL 332
           PW   Y +RPWV   HQ + VL G +
Sbjct: 486 PWHTFYDYRPWVQHGHQ-ELVLGGEV 510


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/47 (21%), Positives = 22/47 (46%)
 Frame = +2

Query: 83  YISQNVIYNIIHKYKLNFMM*VVKAIFLNSYGLKTENLLKIRLLFFV 223
           ++  NV++ +IH Y       ++   F+  Y  +   L    +L+F+
Sbjct: 103 FVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFL 149


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/47 (21%), Positives = 22/47 (46%)
 Frame = +2

Query: 83  YISQNVIYNIIHKYKLNFMM*VVKAIFLNSYGLKTENLLKIRLLFFV 223
           ++  NV++ +IH Y       ++   F+  Y  +   L    +L+F+
Sbjct: 103 FVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFL 149


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 10/47 (21%), Positives = 22/47 (46%)
 Frame = +2

Query: 83  YISQNVIYNIIHKYKLNFMM*VVKAIFLNSYGLKTENLLKIRLLFFV 223
           ++  NV++ +IH Y       ++   F+  Y  +   L    +L+F+
Sbjct: 423 FVVANVLFQLIHVYYTVVFTLLLGVDFVKEYAFEYIQLYSQFILYFL 469


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 248  TDIGQDLKKQKITIVSSASFP 186
            T IG+    +K+T+  SAS P
Sbjct: 1286 TTIGEGQPSKKVTVSPSASVP 1306


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 22  KYLLHTEYVTSHKYSKST*N 81
           KYL   E  T + YSK+T N
Sbjct: 333 KYLCKNEDETKNHYSKNTYN 352


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +1

Query: 22  KYLLHTEYVTSHKYSKST*N 81
           KYL   E  T + YSK+T N
Sbjct: 225 KYLCKNEDETKNHYSKNTYN 244


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 455 TDHNIARQSKTIGSGLAL 402
           TDHN+ R   TIG   A+
Sbjct: 2   TDHNLLRLIVTIGEFFAM 19


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,210
Number of Sequences: 336
Number of extensions: 3675
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)