Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0515
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    30   0.058
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         28   0.31 
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     28   0.31 
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     28   0.31 
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     28   0.31 
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   5.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   6.7  

>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 30.3 bits (65), Expect = 0.058
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -1

Query: 518  QGSLAFPGHVLGRPSPEVSMPTDHNIARQSKTIGSGLALPLVFLASMGNHSSSGG 354
            +G    PG VL    P+       ++   +     G ALP+ F+AS G+H+  GG
Sbjct: 836  RGGTLKPGDVLLSNHPQAGGSHLPDLTVITPVFAPGEALPVFFVASRGHHADIGG 890


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 169 VKKNRFYYLHHKVQFIFMNNIIYYVLRNIHFRYSYYTYV 53
           V   +F   +   +F+F     + VLRNIH    Y  Y+
Sbjct: 21  VPSTKFEAKYADKEFLFKQKFFFEVLRNIHLPLKYDEYI 59


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 169 VKKNRFYYLHHKVQFIFMNNIIYYVLRNIHFRYSYYTYV 53
           V   +F   +   +F+F     + VLRNIH    Y  Y+
Sbjct: 21  VPSTKFEAKYADKEFLFKQKFFFEVLRNIHLPLKYDEYI 59


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 169 VKKNRFYYLHHKVQFIFMNNIIYYVLRNIHFRYSYYTYV 53
           V   +F   +   +F+F     + VLRNIH    Y  Y+
Sbjct: 21  VPSTKFEAKYADKEFLFKQKFFFEVLRNIHLPLKYDEYI 59


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -2

Query: 169 VKKNRFYYLHHKVQFIFMNNIIYYVLRNIHFRYSYYTYV 53
           V   +F   +   +F+F     + VLRNIH    Y  Y+
Sbjct: 21  VPSTKFEAKYADKEFLFKQKFFFEVLRNIHLPLKYDEYI 59


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +2

Query: 368 SGYPWTPGIPGAEPSR 415
           SG     G+PGAEPSR
Sbjct: 173 SGNLGASGVPGAEPSR 188


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +2

Query: 371 GYPWTPGIPGAEPSRCLSFLIDERYCDLWAC*LQAKVDPAR--VPEKPGFPGA 523
           G P  PG+PGA+  R L   +  R  D   C    K D        +PG PGA
Sbjct: 556 GEPGRPGLPGAKGERGLKGELGGRCTD---CRPGMKGDKGERGYAGEPGRPGA 605


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,147
Number of Sequences: 2352
Number of extensions: 14249
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)