BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brS-0512 (740 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF269153-1|AAF91398.1| 109|Anopheles gambiae labial homeotic pr... 26 1.4 AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 5.7 AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 23 7.5 AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 23 9.9 AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 9.9 >AF269153-1|AAF91398.1| 109|Anopheles gambiae labial homeotic protein protein. Length = 109 Score = 25.8 bits (54), Expect = 1.4 Identities = 13/32 (40%), Positives = 19/32 (59%) Frame = +3 Query: 612 PIAISKHLVIPQAQINNNTSGRENYGSKTPTK 707 P A+S H INNN++GR N+ +K T+ Sbjct: 38 PSAVSPHQ--SSFMINNNSTGRTNFTNKQLTE 67 >AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein protein. Length = 1645 Score = 23.8 bits (49), Expect = 5.7 Identities = 11/40 (27%), Positives = 20/40 (50%) Frame = +3 Query: 600 DLGTPIAISKHLVIPQAQINNNTSGRENYGSKTPTKDGST 719 +L P KH ++P + + G + K+PTK+ +T Sbjct: 853 ELKKPKDFRKHSLLPLNNVFDRIKGALPHLKKSPTKEDAT 892 >AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. Length = 753 Score = 23.4 bits (48), Expect = 7.5 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 1/29 (3%) Frame = +3 Query: 435 LCEQHYQEFWCSLKCGQLEARV-QLFPAP 518 L Q E+WCS+ +L+ +V ++F P Sbjct: 517 LSRQPAPEYWCSVAYFELDTQVGEMFKVP 545 >AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. Length = 506 Score = 23.0 bits (47), Expect = 9.9 Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Frame = +3 Query: 447 HYQEFWCSLKCGQLEARV-QLFPAPQ 521 H FWCS+ +L RV + F A Q Sbjct: 308 HEPTFWCSISYYELNLRVGETFHASQ 333 >AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. Length = 2259 Score = 23.0 bits (47), Expect = 9.9 Identities = 17/46 (36%), Positives = 23/46 (50%) Frame = +3 Query: 6 DVAVPFTKYFDSIRTKLPQIEEGDKTCIDSALLGVNQLVMNEWGHQ 143 DVA +F S T L IE+G D +LL V++ N +G Q Sbjct: 118 DVASADVLFFGSETTLLQYIEQGTVRVQDISLLIVDECHKN-YGRQ 162 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 805,682 Number of Sequences: 2352 Number of extensions: 16752 Number of successful extensions: 27 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 76091949 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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