Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0512
(740 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118537-1|AAM49906.1| 587|Drosophila melanogaster LD26982p pro... 77 3e-14
AE014134-216|AAF51404.1| 587|Drosophila melanogaster CG4785-PA ... 77 3e-14
X15400-1|CAA33450.1| 604|Drosophila melanogaster glass protein ... 29 5.0
AY060322-1|AAL25361.1| 557|Drosophila melanogaster GH20219p pro... 29 5.0
AE014297-2508|AAF55544.2| 557|Drosophila melanogaster CG7672-PB... 29 5.0
AE014297-2507|AAF55543.1| 604|Drosophila melanogaster CG7672-PA... 29 5.0
BT030441-1|ABO52861.1| 759|Drosophila melanogaster RE42355p pro... 29 6.6
AY118891-1|AAM50751.1| 1508|Drosophila melanogaster LD01189p pro... 29 6.6
AY052025-1|AAK93449.1| 1183|Drosophila melanogaster LD47622p pro... 29 6.6
AE014134-313|ABI31283.1| 1504|Drosophila melanogaster CG7337-PB,... 29 6.6
AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,... 29 6.6
AE014134-311|AAF51327.2| 1508|Drosophila melanogaster CG7337-PA,... 29 6.6
>AY118537-1|AAM49906.1| 587|Drosophila melanogaster LD26982p
protein.
Length = 587
Score = 76.6 bits (180), Expect = 3e-14
Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Frame = +3
Query: 6 DVAVPFTKYFDSIRTKLPQIEEGDKTCIDSALLGVNQLVMNEWGHQTPIQIILITDGSSG 185
++ V FT+ +D +R + ++E DK C+ S L V +M+ WG+Q +Q+++ TD G
Sbjct: 59 ELKVDFTRDYDQVRQAVKKVEPVDKACLMSMLKAVVS-IMSPWGNQNILQVVVFTDCGLG 117
Query: 186 VGAIGRNRIIQSLP----------LPTLYPVKIHILPIVSPHDPCLQHAMPLYQKIIDQA 335
G +++ L TL ++ + + D + +YQ+++D+
Sbjct: 118 FGNTSITGFLEAYAEKESEPEFGFLKTLANYNLNFICLGLHGDYYFTRGLAVYQQLLDKV 177
Query: 336 TVTAN-------NSNGTISRGSIYCPE-----QLSVSSVIAAMTRLCEQHYQEFWCSLKC 479
++ S+ + P +L ++V + RLCE Y+ +LKC
Sbjct: 178 SLKGQLFMTKPAKSSDAVEGNPNPNPNPSHKSELGRTTVFELIERLCEASYKSSEVTLKC 237
Query: 480 G---QLEARVQLFP--AP-QTVSH---ESLTATYTLSNQLHIIGFVQQQDLGTPIAISKH 632
G ++EA V L+P AP + SH T +T ++ + GF+ D+G+P +S+H
Sbjct: 238 GSYFRMEASVLLWPPTAPYEQKSHIFGREPTIRHT-DQKIEVCGFLSLSDIGSPATLSRH 296
Query: 633 LVIPQAQINNNTSGREN 683
V+P+ + + S R +
Sbjct: 297 WVLPKVEREKSGSSRRS 313
>AE014134-216|AAF51404.1| 587|Drosophila melanogaster CG4785-PA
protein.
Length = 587
Score = 76.6 bits (180), Expect = 3e-14
Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 31/257 (12%)
Frame = +3
Query: 6 DVAVPFTKYFDSIRTKLPQIEEGDKTCIDSALLGVNQLVMNEWGHQTPIQIILITDGSSG 185
++ V FT+ +D +R + ++E DK C+ S L V +M+ WG+Q +Q+++ TD G
Sbjct: 59 ELKVDFTRDYDQVRQAVKKVEPVDKACLMSMLKAVVS-IMSPWGNQNILQVVVFTDCGLG 117
Query: 186 VGAIGRNRIIQSLP----------LPTLYPVKIHILPIVSPHDPCLQHAMPLYQKIIDQA 335
G +++ L TL ++ + + D + +YQ+++D+
Sbjct: 118 FGNTSITGFLEAYAEKESEPEFGFLKTLANYNLNFICLGLHGDYYFTRGLAVYQQLLDKV 177
Query: 336 TVTAN-------NSNGTISRGSIYCPE-----QLSVSSVIAAMTRLCEQHYQEFWCSLKC 479
++ S+ + P +L ++V + RLCE Y+ +LKC
Sbjct: 178 SLKGQLFMTKPAKSSDAVEGNPNPNPNPSHKSELGRTTVFELIERLCEASYKSSEVTLKC 237
Query: 480 G---QLEARVQLFP--AP-QTVSH---ESLTATYTLSNQLHIIGFVQQQDLGTPIAISKH 632
G ++EA V L+P AP + SH T +T ++ + GF+ D+G+P +S+H
Sbjct: 238 GSYFRMEASVLLWPPTAPYEQKSHIFGREPTIRHT-DQKIEVCGFLSLSDIGSPATLSRH 296
Query: 633 LVIPQAQINNNTSGREN 683
V+P+ + + S R +
Sbjct: 297 WVLPKVEREKSGSSRRS 313
>X15400-1|CAA33450.1| 604|Drosophila melanogaster glass protein
protein.
Length = 604
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 218 LNYSVPSNSTNSTASISYQNNLYRCLVSP 132
+N++ PSNST++ A+ + N LY L+SP
Sbjct: 305 MNWTPPSNSTSAAAAAAAVNVLYPPLLSP 333
>AY060322-1|AAL25361.1| 557|Drosophila melanogaster GH20219p
protein.
Length = 557
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 218 LNYSVPSNSTNSTASISYQNNLYRCLVSP 132
+N++ PSNST++ A+ + N LY L+SP
Sbjct: 305 MNWTPPSNSTSAAAAAAAVNVLYPPLLSP 333
>AE014297-2508|AAF55544.2| 557|Drosophila melanogaster CG7672-PB,
isoform B protein.
Length = 557
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 218 LNYSVPSNSTNSTASISYQNNLYRCLVSP 132
+N++ PSNST++ A+ + N LY L+SP
Sbjct: 305 MNWTPPSNSTSAAAAAAAVNVLYPPLLSP 333
>AE014297-2507|AAF55543.1| 604|Drosophila melanogaster CG7672-PA,
isoform A protein.
Length = 604
Score = 29.5 bits (63), Expect = 5.0
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -1
Query: 218 LNYSVPSNSTNSTASISYQNNLYRCLVSP 132
+N++ PSNST++ A+ + N LY L+SP
Sbjct: 305 MNWTPPSNSTSAAAAAAAVNVLYPPLLSP 333
>BT030441-1|ABO52861.1| 759|Drosophila melanogaster RE42355p
protein.
Length = 759
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 561 SNQLHIIGFVQQQDLGTPIAISKHLVIPQAQINNNTSGRENYGSKTPTKDGSTTE 725
SN+L Q + G PIA ++ +NNN N+ S TP +D S++E
Sbjct: 539 SNRLRSASNGQGRSNG-PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSE 592
>AY118891-1|AAM50751.1| 1508|Drosophila melanogaster LD01189p protein.
Length = 1508
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 561 SNQLHIIGFVQQQDLGTPIAISKHLVIPQAQINNNTSGRENYGSKTPTKDGSTTE 725
SN+L Q + G PIA ++ +NNN N+ S TP +D S++E
Sbjct: 1288 SNRLRSASNGQGRSNG-PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSE 1341
>AY052025-1|AAK93449.1| 1183|Drosophila melanogaster LD47622p protein.
Length = 1183
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 561 SNQLHIIGFVQQQDLGTPIAISKHLVIPQAQINNNTSGRENYGSKTPTKDGSTTE 725
SN+L Q + G PIA ++ +NNN N+ S TP +D S++E
Sbjct: 963 SNRLRSASNGQGRSNG-PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSE 1016
>AE014134-313|ABI31283.1| 1504|Drosophila melanogaster CG7337-PB,
isoform B protein.
Length = 1504
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 561 SNQLHIIGFVQQQDLGTPIAISKHLVIPQAQINNNTSGRENYGSKTPTKDGSTTE 725
SN+L Q + G PIA ++ +NNN N+ S TP +D S++E
Sbjct: 1284 SNRLRSASNGQGRSNG-PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSE 1337
>AE014134-312|ABI31282.1| 2347|Drosophila melanogaster CG7337-PC,
isoform C protein.
Length = 2347
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 561 SNQLHIIGFVQQQDLGTPIAISKHLVIPQAQINNNTSGRENYGSKTPTKDGSTTE 725
SN+L Q + G PIA ++ +NNN N+ S TP +D S++E
Sbjct: 2127 SNRLRSASNGQGRSNG-PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSE 2180
>AE014134-311|AAF51327.2| 1508|Drosophila melanogaster CG7337-PA,
isoform A protein.
Length = 1508
Score = 29.1 bits (62), Expect = 6.6
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +3
Query: 561 SNQLHIIGFVQQQDLGTPIAISKHLVIPQAQINNNTSGRENYGSKTPTKDGSTTE 725
SN+L Q + G PIA ++ +NNN N+ S TP +D S++E
Sbjct: 1288 SNRLRSASNGQGRSNG-PIAANRQYSNKINNVNNNRRKTPNFSSATPMQDDSSSE 1341
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,841,186
Number of Sequences: 53049
Number of extensions: 756559
Number of successful extensions: 1787
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1689
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1785
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3355404063
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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