Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0511
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.3  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    23   8.4  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    23   8.4  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 434  NNYQTNREGFAKLFRKLSDDSWE 502
            NN+QT  +    LFR  + ++W+
Sbjct: 1346 NNFQTFPQAVLVLFRSATGEAWQ 1368


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 430 LQQLPDEQGRIREALQEIIGRFVGE 504
           L + PD QGR+RE ++  +    GE
Sbjct: 327 LAKNPDIQGRLREEIERAVEENGGE 351


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 172 RIRH*INRIKYEGVCSHRCLS 234
           RI H I+R      CSH CL+
Sbjct: 117 RINHRIDRFSKIYCCSHLCLA 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,754
Number of Sequences: 2352
Number of extensions: 12429
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)