Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0510
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    27   0.12 
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   3.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.9  

>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
 Frame = +3

Query: 108 ISLQLNCTVFLDLPTDIIWFSLCLVP---YVLWGVL 206
           ISL+    V L L T ++ F LCL+P   ++LW +L
Sbjct: 280 ISLRARKQVVLMLGTVVLSFFLCLIPFRVFILWIIL 315


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 638 AFALRFTIFNLYIV 597
           +F + F IFNLY+V
Sbjct: 112 SFRMNFAIFNLYMV 125


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 500 LKKKGVEIENSVTPCIFVWLFEYV*KCI*SHTSFFYLL 387
           +KK G   EN      F+++F  V KC+    S  ++L
Sbjct: 281 IKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFIL 318


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 500 LKKKGVEIENSVTPCIFVWLFEYV*KCI*SHTSFFYLL 387
           +KK G   EN      F+++F  V KC+    S  ++L
Sbjct: 281 IKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFIL 318


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 500 LKKKGVEIENSVTPCIFVWLFEYV*KCI*SHTSFFYLL 387
           +KK G   EN      F+++F  V KC+    S  ++L
Sbjct: 281 IKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFIL 318


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 500 LKKKGVEIENSVTPCIFVWLFEYV*KCI*SHTSFFYLL 387
           +KK G   EN      F+++F  V KC+    S  ++L
Sbjct: 281 IKKLGKIKENLEQSRYFIYMFVSVWKCLLFFVSVLFIL 318


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 534 VKSYFNFHENFLHEKFST 587
           VKSYF  H + LH  +++
Sbjct: 7   VKSYFTTHHDTLHNIYTS 24


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 534 VKSYFNFHENFLHEKFST 587
           VKSYF  H + LH  +++
Sbjct: 7   VKSYFTTHHDTLHNIYTS 24


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 615  YRKP*SEGSWQTKLTAA 665
            YR P +   WQTK T +
Sbjct: 1174 YRPPSTTNHWQTKTTTS 1190


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 534 VKSYFNFHENFLHEK 578
           +  ++NF+EN +H K
Sbjct: 420 ITPFYNFNENTIHSK 434


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,172
Number of Sequences: 336
Number of extensions: 3617
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)