Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0510
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            26   1.0  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   7.4  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.7  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   9.7  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 13/49 (26%), Positives = 24/49 (48%)
 Frame = +3

Query: 534  VKSYFNFHENFLHEKFSTQTINNVQIKYRKP*SEGSWQTKLTAAHHMTQ 680
            +K YF F+ENF+ +   T  + +  +    P  EG   ++   A+  T+
Sbjct: 1748 LKEYFAFYENFITQVHGTSHVMSGMVAKAHPSCEGFPYSRTIYANDPTE 1796


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +3

Query: 537 KSYFNFHENFLHEKFSTQTINNVQIKY 617
           KSY   HE  L E F+++T  ++  ++
Sbjct: 83  KSYITRHEGALQEHFTSRTARSLLAQF 109


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 131 CFFRFTHGHNLVLFVSCAVC 190
           C++ FT  +  VL  +C VC
Sbjct: 164 CYYHFTVEYYTVLGAACQVC 183


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +2

Query: 131 CFFRFTHGHNLVLFVSCAVC 190
           C++ FT  +  VL  +C VC
Sbjct: 164 CYYHFTVEYYTVLGAACQVC 183


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 718,569
Number of Sequences: 2352
Number of extensions: 14612
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)