Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0510
         (731 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT015996-1|AAV36881.2|  596|Drosophila melanogaster RE49741p pro...    29   8.6  
AY058543-1|AAL13772.1|  596|Drosophila melanogaster LD24465p pro...    29   8.6  
AE014297-2915|AAN13847.1|  596|Drosophila melanogaster CG3671-PB...    29   8.6  
AE014297-2914|AAF55839.2|  596|Drosophila melanogaster CG3671-PA...    29   8.6  
AE014296-967|AAN12099.1|  112|Drosophila melanogaster CG10622-PB...    29   8.6  

>BT015996-1|AAV36881.2|  596|Drosophila melanogaster RE49741p
           protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 668 MRGGELSLPAAFALRFTIFNLYIV 597
           ++GG L+L   FA+ + +FNLY+V
Sbjct: 516 IKGGLLALVCIFAILYILFNLYLV 539


>AY058543-1|AAL13772.1|  596|Drosophila melanogaster LD24465p
           protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 668 MRGGELSLPAAFALRFTIFNLYIV 597
           ++GG L+L   FA+ + +FNLY+V
Sbjct: 516 IKGGLLALVCIFAILYILFNLYLV 539


>AE014297-2915|AAN13847.1|  596|Drosophila melanogaster CG3671-PB,
           isoform B protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 668 MRGGELSLPAAFALRFTIFNLYIV 597
           ++GG L+L   FA+ + +FNLY+V
Sbjct: 516 IKGGLLALVCIFAILYILFNLYLV 539


>AE014297-2914|AAF55839.2|  596|Drosophila melanogaster CG3671-PA,
           isoform A protein.
          Length = 596

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -1

Query: 668 MRGGELSLPAAFALRFTIFNLYIV 597
           ++GG L+L   FA+ + +FNLY+V
Sbjct: 516 IKGGLLALVCIFAILYILFNLYLV 539


>AE014296-967|AAN12099.1|  112|Drosophila melanogaster CG10622-PB,
           isoform B protein.
          Length = 112

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +1

Query: 496 FKGI*DLVTKTFRSSLILIFMKTFYMKN 579
           FKG   + TK +R  L  +F  TFY+KN
Sbjct: 85  FKGGVHITTKYYRLGLFRLFTFTFYLKN 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,334,709
Number of Sequences: 53049
Number of extensions: 571413
Number of successful extensions: 871
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3293648160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)