Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0509
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7VIC5 Cluster: Cation-transporting ATPase; n=1; Helico...    34   3.0  
UniRef50_Q9XSA0 Cluster: Pulmonary surfactant-associated protein...    33   9.2  
UniRef50_Q2KFN1 Cluster: Putative uncharacterized protein; n=2; ...    33   9.2  

>UniRef50_Q7VIC5 Cluster: Cation-transporting ATPase; n=1;
           Helicobacter hepaticus|Rep: Cation-transporting ATPase -
           Helicobacter hepaticus
          Length = 747

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 25/62 (40%), Positives = 35/62 (56%)
 Frame = +3

Query: 267 LSTKVKMLILRILPI*KFIGAVNSWSEAVCSISTIQTLNFTNVLVLSTFWYVFH*SAIFH 446
           LST+ K+++  I  I   I  V SWSE    IS   TL++T +LVLS    V H   +F+
Sbjct: 99  LSTQTKLIVSIIATI---IVVVLSWSEMFIGISLPYTLHYTLLLVLSL--AVMHMGRMFY 153

Query: 447 LQ 452
           L+
Sbjct: 154 LR 155


>UniRef50_Q9XSA0 Cluster: Pulmonary surfactant-associated protein B;
           n=1; Ovis aries|Rep: Pulmonary surfactant-associated
           protein B - Ovis aries (Sheep)
          Length = 158

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
 Frame = +2

Query: 236 HW*NLRSGISPEHESENVNIKNFAHMKI---HWSC*FMVRGSM-----LH*YDSNLEFYK 391
           HW  L    SP HESENV +K+ +H+++    W+  +    SM     L    S+L F  
Sbjct: 39  HWSGLPFP-SPMHESENVKVKSLSHVRLPATPWTAAYQAPASMGFSSLLSSLLSSLAFSA 97

Query: 392 CSGP-IYILVCFPLK 433
            S P +++  C P++
Sbjct: 98  VSEPEVHLSACGPMQ 112


>UniRef50_Q2KFN1 Cluster: Putative uncharacterized protein; n=2;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea 70-15
          Length = 536

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/57 (31%), Positives = 29/57 (50%)
 Frame = +3

Query: 204 HNHQIMTVYAHIGKI*GPGSVLSTKVKMLILRILPI*KFIGAVNSWSEAVCSISTIQ 374
           H+H++ +V    GK+ G G   + KV +++       K I +  SW EA  S+ T Q
Sbjct: 92  HDHRMQSVSRSWGKLVGKGPGDNAKVSLMLNDFEDADKLIDSAKSWREAWISLVTSQ 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,745,669
Number of Sequences: 1657284
Number of extensions: 12585869
Number of successful extensions: 22738
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22732
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)