Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0506
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    26   0.37 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.6  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.5  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.8 bits (54), Expect = 0.37
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = -3

Query: 717 VLIYIFNSLNLLTDSVEQ*SDRWAVVLVVDSIPTSGLNGSK 595
           +LI +FNSL  + + +E+    W+  L++  I    L G+K
Sbjct: 300 ILIQLFNSLRRMRNDLERLYFYWSFALLITRIVCLCLFGAK 340


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 623 IESTTSTTAQRSDYCSTESVKRFN 694
           + S   TT    DYC+   V+RFN
Sbjct: 494 VRSVFVTTYLMFDYCTVLRVQRFN 517


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 123 VSNTPGLSPVSTPTSSVNLE*VGIKKMPEYLL 28
           +S   G++P+S   S+VN   +GI +   Y +
Sbjct: 16  LSKILGIAPISYKNSNVNYSKIGIVQTVAYFV 47


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 315 RKHPRSTAPSDAEPFA 268
           RK P + +P D +PFA
Sbjct: 188 RKEPLAFSPEDLDPFA 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,490
Number of Sequences: 336
Number of extensions: 3172
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)