Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0506
(755 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051771-1|AAH51771.1| 546|Homo sapiens FAM124A protein protein. 32 2.6
AL157817-3|CAI14260.1| 546|Homo sapiens family with sequence si... 32 2.6
AL157817-2|CAM20007.1| 582|Homo sapiens family with sequence si... 32 2.6
AK096364-1|BAC04769.1| 582|Homo sapiens protein ( Homo sapiens ... 32 2.6
AK055269-1|BAB70894.1| 546|Homo sapiens protein ( Homo sapiens ... 32 2.6
AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens ... 31 5.9
AJ249288-1|CAB65111.1| 41|Homo sapiens IkappaBalpha protein. 31 5.9
AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein pr... 31 5.9
AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein pr... 31 5.9
>BC051771-1|AAH51771.1| 546|Homo sapiens FAM124A protein protein.
Length = 546
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 257 GPVQPRIPL-HVGKRINRSQSSPNPSLATKGSASRFCEALPLLGPVLAT 114
GP++ +P H + R+ S+PNP + + S S FC LP GP LA+
Sbjct: 329 GPIRTGLPPGHQQEFAGRANSTPNPPWSFQRSKSLFC--LPTGGPSLAS 375
>AL157817-3|CAI14260.1| 546|Homo sapiens family with sequence
similarity 124A protein.
Length = 546
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 257 GPVQPRIPL-HVGKRINRSQSSPNPSLATKGSASRFCEALPLLGPVLAT 114
GP++ +P H + R+ S+PNP + + S S FC LP GP LA+
Sbjct: 329 GPIRTGLPPGHQQEFAGRANSTPNPPWSFQRSKSLFC--LPTGGPSLAS 375
>AL157817-2|CAM20007.1| 582|Homo sapiens family with sequence
similarity 124A protein.
Length = 582
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 257 GPVQPRIPL-HVGKRINRSQSSPNPSLATKGSASRFCEALPLLGPVLAT 114
GP++ +P H + R+ S+PNP + + S S FC LP GP LA+
Sbjct: 365 GPIRTGLPPGHQQEFAGRANSTPNPPWSFQRSKSLFC--LPTGGPSLAS 411
>AK096364-1|BAC04769.1| 582|Homo sapiens protein ( Homo sapiens
cDNA FLJ39045 fis, clone NT2RP7010521. ).
Length = 582
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 257 GPVQPRIPL-HVGKRINRSQSSPNPSLATKGSASRFCEALPLLGPVLAT 114
GP++ +P H + R+ S+PNP + + S S FC LP GP LA+
Sbjct: 365 GPIRTGLPPGHQQEFAGRANSTPNPPWSFQRSKSLFC--LPTGGPSLAS 411
>AK055269-1|BAB70894.1| 546|Homo sapiens protein ( Homo sapiens
cDNA FLJ30707 fis, clone FCBBF2001211. ).
Length = 546
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = -1
Query: 257 GPVQPRIPL-HVGKRINRSQSSPNPSLATKGSASRFCEALPLLGPVLAT 114
GP++ +P H + R+ S+PNP + + S S FC LP GP LA+
Sbjct: 329 GPIRTGLPPGHQQEFAGRANSTPNPPWSFQRSKSLFC--LPTGGPSLAS 375
>AK125953-1|BAC86359.1| 416|Homo sapiens protein ( Homo sapiens
cDNA FLJ43965 fis, clone TESTI4017001. ).
Length = 416
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 94 HGAQTGSVANTGPS-KGSASQNLLAEPFVASDGFGEDCERLILLPTCKG 237
+G + A TG + SAS L AE + D F + C R++ L C G
Sbjct: 60 YGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLSLLNCGG 108
>AJ249288-1|CAB65111.1| 41|Homo sapiens IkappaBalpha protein.
Length = 41
Score = 30.7 bits (66), Expect = 5.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 227 RAKGSAAALDPQCKANGSASLGAVDLGCLRSTGIL 331
RA G AA DP A G+A LGA++ R G++
Sbjct: 7 RADGQGAAGDPPRAAGGAARLGALEAAAHRGRGLV 41
>AB126829-1|BAD93192.1| 437|Homo sapiens hypothetical protein
protein.
Length = 437
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 94 HGAQTGSVANTGPS-KGSASQNLLAEPFVASDGFGEDCERLILLPTCKG 237
+G + A TG + SAS L AE + D F + C R++ L C G
Sbjct: 134 YGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLSLLNCGG 182
>AB126828-1|BAD93191.1| 530|Homo sapiens hypothetical protein
protein.
Length = 530
Score = 30.7 bits (66), Expect = 5.9
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 94 HGAQTGSVANTGPS-KGSASQNLLAEPFVASDGFGEDCERLILLPTCKG 237
+G + A TG + SAS L AE + D F + C R++ L C G
Sbjct: 134 YGPGAAAAAGTGGTGSDSASLELSAESRMILDAFAQQCSRVLSLLNCGG 182
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,632,706
Number of Sequences: 237096
Number of extensions: 2005563
Number of successful extensions: 3774
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3774
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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