Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0503
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    27   0.75 
AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha su...    23   9.2  
AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha su...    23   9.2  
AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha su...    23   9.2  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 322 NARNEYVDTTIAKAIDFYTQK 384
           NA  EYV TT+ KAI  YT K
Sbjct: 127 NADGEYVVTTLTKAILHYTGK 147


>AY724808-1|AAW50317.1|  206|Anopheles gambiae G protein alpha
           subunit AgGq6 protein.
          Length = 206

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 336 FVSRVHVEKISSPERVCQRIFKCS 265
           F+ +V++ +   P+R+C   F C+
Sbjct: 159 FILKVYLRENPDPDRMCYSHFTCA 182


>AY724806-1|AAW50315.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq4 protein.
          Length = 163

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 336 FVSRVHVEKISSPERVCQRIFKCS 265
           F+ +V++ +   P+R+C   F C+
Sbjct: 116 FILKVYLRENPDPDRMCYSHFTCA 139


>AY724803-1|AAW50312.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq1 protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 336 FVSRVHVEKISSPERVCQRIFKCS 265
           F+ +V++ +   P+R+C   F C+
Sbjct: 115 FILKVYLRENPDPDRMCYSHFTCA 138


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,775
Number of Sequences: 2352
Number of extensions: 14343
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)