Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0502
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   1.1  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.9  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   4.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   5.9  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   7.8  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   7.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -1

Query: 344 KTSLMTASFCVWTILF-ISSILTLVSASILAATPSLV 237
           KT L T  +C + ILF +S  + LV  + L  TP+ V
Sbjct: 313 KTVLKTNKYCNFIILFYLSVFVILVYYASLDETPNPV 349


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -2

Query: 202 FHAPVCTFQLHLEPPP 155
           FHA   +  LH  PPP
Sbjct: 151 FHAAATSLPLHYPPPP 166


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = -1

Query: 362 MSYTRFKTSLMTAS-FCVWTILFISSILTLVSASILAATPSLV 237
           +S T+   +L+TA  +C   I  +  +L   + SIL   PSL+
Sbjct: 400 LSKTKTFCTLVTALVYCSLAIFVLCELLIEGTTSILINVPSLI 442


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 72  NSFYC*KTRCGESQRGKEAKSKTPKAGQGGGSR*S*KVQTGA*KAV 209
           N F C   R   S  G+E K   P A   G S+ + K + G+ K +
Sbjct: 45  NYFNCLMERGTCSPDGEELKKALPDALHSGCSKCTEKQKEGSRKII 90


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 212 KNLKPSTWVPGKVLRPRSM 268
           KNL  S ++  K  RPRS+
Sbjct: 177 KNLYYSFYISDKAARPRSL 195


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +3

Query: 90  KTRCGESQRGKEAKSKTPKAGQGGGSR*S*KVQTGA*KAVQRI 218
           K +C  +  G+E K   P+A Q G ++ + K + G  K +  +
Sbjct: 50  KGKC--TPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHL 90


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +3

Query: 90  KTRCGESQRGKEAKSKTPKAGQGGGSR*S*KVQTGA*KAVQRI 218
           K +C  +  G+E K   P+A Q G ++ + K + G  K +  +
Sbjct: 50  KGKC--TPEGEELKKDIPEALQNGCAKCNEKHKEGVRKVIHHL 90


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 291  FDLNFGLGIDLGRNTFPGTHVLGFKFFELPFT 196
            F+ NF L   + +   PG  V+G   +   F+
Sbjct: 2540 FNANFSLNYWIEKGADPGKIVMGMPLYGQSFS 2571


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,135
Number of Sequences: 336
Number of extensions: 1653
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)