Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0499
         (730 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q675B8 Cluster: Taste receptor type 2 member 117; n=1; ...    34   4.1  
UniRef50_Q8ILH0 Cluster: Putative uncharacterized protein; n=3; ...    33   5.4  
UniRef50_Q49WV3 Cluster: Putative transporter; n=1; Staphylococc...    33   7.2  
UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena pigment...    33   7.2  

>UniRef50_Q675B8 Cluster: Taste receptor type 2 member 117; n=1;
           Rattus norvegicus|Rep: Taste receptor type 2 member 117
           - Rattus norvegicus (Rat)
          Length = 318

 Score = 33.9 bits (74), Expect = 4.1
 Identities = 29/97 (29%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
 Frame = -1

Query: 502 INNILKIPLINAIIKV*FVYNNY*LTTALFRKVSC--LIDIGH-NINQFILLHLHVFVKI 332
           I+ I ++ L+   + + F Y +  LTT    KV+C   I + H NI     L +  F+KI
Sbjct: 60  ISRIFQLCLLFISLVISFSYPD--LTTTSLIKVTCNLWIIVNHFNIWLATCLGIFYFLKI 117

Query: 331 FNFNSMLFCVLSVVVSYYLIILNLVEQYVL*VDSIMM 221
            NF++ LF  L   V   +++  LV   +L ++S+++
Sbjct: 118 SNFSNSLFLYLKWRVEKVVLVTLLVSLVLLTLNSLLI 154


>UniRef50_Q8ILH0 Cluster: Putative uncharacterized protein; n=3;
            cellular organisms|Rep: Putative uncharacterized protein
            - Plasmodium falciparum (isolate 3D7)
          Length = 2779

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 33   GVCMCCHLW-IKQHIIDHYNILKSVQLNQKQKQLGKWLSWLEL 158
            G+C  C ++ +K+ +ID+ NI+K  Q  +      KW++  EL
Sbjct: 2646 GLCRTCEIFNVKKLLIDNINIIKDYQFQKISSTANKWMNIKEL 2688


>UniRef50_Q49WV3 Cluster: Putative transporter; n=1; Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305|Rep:
           Putative transporter - Staphylococcus saprophyticus
           subsp. saprophyticus (strain ATCC 15305 /DSM 20229)
          Length = 207

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +1

Query: 559 VTFYT*ILYSFIYNTSNFQLFVSIFNFRFIVIGIRWYTI 675
           + FY  IL  FI + SN  + V+IF+  FI+  I W+++
Sbjct: 128 ILFYISILPQFINHQSNQSIQVAIFSILFIITVITWFSL 166


>UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena
           pigmentosa|Rep: Heme maturase - Tetrahymena pigmentosa
          Length = 522

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 25/89 (28%), Positives = 48/89 (53%)
 Frame = -1

Query: 496 NILKIPLINAIIKV*FVYNNY*LTTALFRKVSCLIDIGHNINQFILLHLHVFVKIFNFNS 317
           NI+KI +I   + + F   NY +       ++ +I+I +NI   ILL + + +K +  N+
Sbjct: 23  NIIKILIIFYYLFINFFIKNYCIDNIYLYILNNIININYNI-LIILLFILINIK-YKINN 80

Query: 316 MLFCVLSVVVSYYLIILNLVEQYVL*VDS 230
           +L    S+++ Y  I  NL   ++L V++
Sbjct: 81  LL---NSIIMIYIFIFNNLYYDFILNVNN 106


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,004,615
Number of Sequences: 1657284
Number of extensions: 9690584
Number of successful extensions: 18604
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18597
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)