Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0497
         (347 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          25   1.1  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          25   1.1  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          25   1.1  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          25   1.1  
AY752895-1|AAV30069.1|   95|Anopheles gambiae peroxidase 3 protein.    23   2.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   4.3  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   4.3  
AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    22   5.7  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    22   7.5  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    22   7.5  
AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskele...    22   7.5  
AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative cytoskel...    22   7.5  
AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding pr...    21   9.9  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 231 QPPPLTEQLFCWNN 272
           QPP LTE+L C +N
Sbjct: 268 QPPTLTEELLCKHN 281


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 231 QPPPLTEQLFCWNN 272
           QPP LTE+L C +N
Sbjct: 268 QPPTLTEELLCKHN 281


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 231 QPPPLTEQLFCWNN 272
           QPP LTE+L C +N
Sbjct: 268 QPPTLTEELLCKHN 281


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 231 QPPPLTEQLFCWNN 272
           QPP LTE+L C +N
Sbjct: 268 QPPTLTEELLCKHN 281


>AY752895-1|AAV30069.1|   95|Anopheles gambiae peroxidase 3 protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 157 LPASLRSALRPTSLPVHLLYSCEH 228
           L A +RS   P +  VHLL+  EH
Sbjct: 1   LVADIRSYQSPMAATVHLLFLREH 24


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 157 LPASLRSALRPTSLPVHLLYSCEH 228
           LP+SL S+   T LP H  Y   H
Sbjct: 486 LPSSLVSSPDGTDLPHHTHYQLHH 509


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 157 LPASLRSALRPTSLPVHLLYSCEH 228
           LP+SL S+   T LP H  Y   H
Sbjct: 462 LPSSLVSSPDGTDLPHHTHYQLHH 485


>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -2

Query: 130 LQVAVQCGYRIVIHWH 83
           + + ++ G+RI + WH
Sbjct: 129 IMIPLEVGWRITVQWH 144



 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -1

Query: 137 SSATSRGAMWISNSYSLAFCKALP 66
           S+A  RG + +  ++ +AF  A+P
Sbjct: 186 SAARKRGKIMLGGAWFIAFVNAMP 209


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 327 KCVLSSLGVSNSTWNQTKHYSNRII 253
           KC+L  +G++   WN T      +I
Sbjct: 74  KCLLRCVGLNLRWWNDTTGMQTAVI 98


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 327 KCVLSSLGVSNSTWNQT 277
           KC+L  +GV    WN T
Sbjct: 66  KCLLFCVGVDLGWWNNT 82


>AJ439060-2|CAD27753.1|  135|Anopheles gambiae putative cytoskeletal
           regulator protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -1

Query: 143 TASSATSRGAMWISNSYSLAFCKA-LPGPSAPGLRH 39
           T  S+ SR    + NSY+L  C +    P+ P  RH
Sbjct: 100 TVVSSISRSRSTVVNSYNLTTCPSWAHAPNGP-CRH 134


>AJ438610-10|CAD27482.1|  135|Anopheles gambiae putative
           cytoskeletal regulator protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -1

Query: 143 TASSATSRGAMWISNSYSLAFCKA-LPGPSAPGLRH 39
           T  S+ SR    + NSY+L  C +    P+ P  RH
Sbjct: 100 TVVSSISRSRSTVVNSYNLTTCPSWAHAPNGP-CRH 134


>AY146748-1|AAO12063.1|  279|Anopheles gambiae odorant-binding
           protein AgamOBP41 protein.
          Length = 279

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 327 KCVLSSLGVSNSTWN 283
           KC++  +G+S   WN
Sbjct: 70  KCLIRCVGISGRFWN 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,685
Number of Sequences: 2352
Number of extensions: 6583
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)