Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0497
         (347 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX537418-1|CAD97660.1| 1977|Homo sapiens hypothetical protein pr...    29   3.0  
BC112161-1|AAI12162.1| 1972|Homo sapiens tumor protein p53 bindi...    29   3.0  
AY904026-1|AAW69392.1| 1972|Homo sapiens tumor protein p53 bindi...    29   3.0  
AF078776-1|AAC62018.1| 1972|Homo sapiens p53 tumor suppressor-bi...    29   3.0  
AB210025-1|BAE06107.1| 1984|Homo sapiens TP53BP1 variant protein...    29   3.0  
AK223598-1|BAD97318.1|  831|Homo sapiens Angiomotin like 2 (Frag...    29   5.3  

>BX537418-1|CAD97660.1| 1977|Homo sapiens hypothetical protein
           protein.
          Length = 1977

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -2

Query: 289 VESNETLFQQNNCSVNGGGCCVRTNTTSVPGGSSASTRTSRMQGVRFSGQLRALQ 125
           + + E LF Q+N +V+  GC   T +    G S AST  + +  ++ SGQ   +Q
Sbjct: 305 LSTQEDLFDQSNKTVSSDGC--STPSREEGGCSLASTPATTLHLLQLSGQRSLVQ 357


>BC112161-1|AAI12162.1| 1972|Homo sapiens tumor protein p53 binding
           protein 1 protein.
          Length = 1972

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -2

Query: 289 VESNETLFQQNNCSVNGGGCCVRTNTTSVPGGSSASTRTSRMQGVRFSGQLRALQ 125
           + + E LF Q+N +V+  GC   T +    G S AST  + +  ++ SGQ   +Q
Sbjct: 300 LSTQEDLFDQSNKTVSSDGC--STPSREEGGCSLASTPATTLHLLQLSGQRSLVQ 352


>AY904026-1|AAW69392.1| 1972|Homo sapiens tumor protein p53 binding
           protein, 1 protein.
          Length = 1972

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -2

Query: 289 VESNETLFQQNNCSVNGGGCCVRTNTTSVPGGSSASTRTSRMQGVRFSGQLRALQ 125
           + + E LF Q+N +V+  GC   T +    G S AST  + +  ++ SGQ   +Q
Sbjct: 300 LSTQEDLFDQSNKTVSSDGC--STPSREEGGCSLASTPATTLHLLQLSGQRSLVQ 352


>AF078776-1|AAC62018.1| 1972|Homo sapiens p53 tumor
           suppressor-binding protein 1 protein.
          Length = 1972

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -2

Query: 289 VESNETLFQQNNCSVNGGGCCVRTNTTSVPGGSSASTRTSRMQGVRFSGQLRALQ 125
           + + E LF Q+N +V+  GC   T +    G S AST  + +  ++ SGQ   +Q
Sbjct: 300 LSTQEDLFDQSNKTVSSDGC--STPSREEGGCSLASTPATTLHLLQLSGQRSLVQ 352


>AB210025-1|BAE06107.1| 1984|Homo sapiens TP53BP1 variant protein
           protein.
          Length = 1984

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = -2

Query: 289 VESNETLFQQNNCSVNGGGCCVRTNTTSVPGGSSASTRTSRMQGVRFSGQLRALQ 125
           + + E LF Q+N +V+  GC   T +    G S AST  + +  ++ SGQ   +Q
Sbjct: 314 LSTQEDLFDQSNKTVSSDGC--STPSREEGGCSLASTPATTLHLLQLSGQRSLVQ 366


>AK223598-1|BAD97318.1|  831|Homo sapiens Angiomotin like 2
           (Fragment) variant protein.
          Length = 831

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = -2

Query: 226 VRTNTTSVPGGSSASTRTSRMQGVRFSGQLRALQVAVQCGYRIVIHWHFVKHSQDRAPPD 47
           +R      PGGSS S  +  +  +R S QLR  +  +      +  W   K+ ++RA   
Sbjct: 575 LRAQQAGAPGGSSGSGGSPELSALRLSEQLREKEEQILALEADMTKWE-QKYLEERAMRQ 633

Query: 46  YA 41
           +A
Sbjct: 634 FA 635


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,827,614
Number of Sequences: 237096
Number of extensions: 1017639
Number of successful extensions: 2782
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2782
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)