Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0497
         (347 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118738-1|AAM50598.1|   87|Drosophila melanogaster GH04760p pro...    29   1.2  
AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4 p...    29   1.2  
AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    29   2.1  
BT015999-1|AAV36884.1|  143|Drosophila melanogaster RE42714p pro...    27   4.9  
AE014296-2763|AAN11735.1|  143|Drosophila melanogaster CG32163-P...    27   4.9  
AY240945-1|AAP69822.1|  949|Drosophila melanogaster G protein co...    27   8.6  
AE014298-2723|AAX52506.1|  991|Drosophila melanogaster CG32547-P...    27   8.6  

>AY118738-1|AAM50598.1|   87|Drosophila melanogaster GH04760p
           protein.
          Length = 87

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = -2

Query: 292 HVESNETLFQQNNCSVNGG-GCCVRTNTTSVPGGSSAST 179
           H+++       + C+ +GG GCC RT+++    G S +T
Sbjct: 2   HLQNQNACNLPHRCARHGGSGCCPRTSSSRTSAGRSGTT 40


>AL009193-3|CAA15694.2|  991|Drosophila melanogaster EG:103B4.4
           protein.
          Length = 991

 Score = 29.5 bits (63), Expect = 1.2
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = +3

Query: 93  ITIRYPHCTATCSARSCPLNLTPCILEVRVEADEPPGTLVVFVRTQQPPP 242
           I++ +P    +C+  S    L P +  VR  +D PP  + +    Q PPP
Sbjct: 491 ISLLFPRSPPSCAETSSLAEL-PRVALVRRSSDRPPTAVAMSTAAQCPPP 539


>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
           protein.
          Length = 3146

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +3

Query: 123 TCSARSCPLNLTPCILEVRVEADEPPGTLVVFVRTQQPPPLTEQ 254
           T    + PL+LTP  + V VEA  PP +  +   + QPP   +Q
Sbjct: 657 TTPTPATPLHLTPVNVPVHVEA-APPSSPALVKGSSQPPAQPQQ 699


>BT015999-1|AAV36884.1|  143|Drosophila melanogaster RE42714p
           protein.
          Length = 143

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 133 ALQVAVQCGYRIVIHWHFVKHSQDRAPPDYA 41
           AL  A+  G+ I+I   FV+H  D+  P YA
Sbjct: 108 ALDYALLNGHFIIIRCRFVQHYIDKYEPQYA 138


>AE014296-2763|AAN11735.1|  143|Drosophila melanogaster CG32163-PA
           protein.
          Length = 143

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -2

Query: 133 ALQVAVQCGYRIVIHWHFVKHSQDRAPPDYA 41
           AL  A+  G+ I+I   FV+H  D+  P YA
Sbjct: 108 ALDYALLNGHFIIIRCRFVQHYIDKYEPQYA 138


>AY240945-1|AAP69822.1|  949|Drosophila melanogaster G protein
           coupled receptor protein.
          Length = 949

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 136 RALQVAVQCGYRIVIHWHFVKHSQDRAPPD 47
           R L + + CG  I++ + +++ SQ+  PPD
Sbjct: 207 RGLFLLMYCGPAILLSYLYIRTSQELRPPD 236


>AE014298-2723|AAX52506.1|  991|Drosophila melanogaster CG32547-PA
           protein.
          Length = 991

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -2

Query: 136 RALQVAVQCGYRIVIHWHFVKHSQDRAPPD 47
           R L + + CG  I++ + +++ SQ+  PPD
Sbjct: 261 RGLFLLMYCGPAILLSYLYIRTSQELRPPD 290


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,848,671
Number of Sequences: 53049
Number of extensions: 319040
Number of successful extensions: 1468
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)