Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0493
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    25   1.9  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    24   5.7  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   7.6  

>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +1

Query: 55  GINVNEHLSQVGGSLSAGSE*FSTTV-LLLYCDTQSCVLAGNIR*DI 192
           G+ +NE  +QV  S  AGSE  STT+   LY   ++  + G +R +I
Sbjct: 295 GLTMNELAAQVFVSFLAGSETSSTTMNFCLYELAKNPDIQGRLREEI 341


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.8 bits (49), Expect = 5.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -2

Query: 619 VFATDVNCNFMEFSSILCFF 560
           ++  ++ C F  FSS LC F
Sbjct: 185 IYIQEICCRFFTFSSSLCCF 204


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 197 KRRALEVLKLLPQRAMRLSSFHYDVFFLF 283
           K+R   VL+ LPQ    +  F Y VF +F
Sbjct: 560 KKRISIVLEFLPQIIFLVLLFAYMVFMMF 588


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,928
Number of Sequences: 2352
Number of extensions: 13878
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)