Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0491
         (708 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    28   0.065
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.26 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.46 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   1.8  
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    23   2.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.3  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   9.8  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   9.8  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 28.3 bits (60), Expect = 0.065
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = -2

Query: 527 VASLIQEQSDLRMKNEENHNTTKSIKKFHFI--HGHKVARAPFLFYFCYFF 381
           V SL    SDL   +EEN  +  ++KK  F+   G  +  AP  FY   F+
Sbjct: 54  VQSLDGNSSDLENSSEENCVSMSNLKKLKFLLKLGQLLGLAPVKFYVQKFY 104


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 272 CAAGSPTCWMRAMRTCCSK 328
           C  G PTCW    +  C K
Sbjct: 878 CENGKPTCWRECDKATCEK 896


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.46
 Identities = 11/45 (24%), Positives = 22/45 (48%)
 Frame = -2

Query: 599 NEVFKKKSFFLSXXXXXXXXNVEHVASLIQEQSDLRMKNEENHNT 465
           N+   K+ F+L+         VEH+ S++   S +  + E+ + T
Sbjct: 304 NDKSLKRKFYLTICTIMSAAAVEHILSIVNTCSQIPSEVEDKYTT 348


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 71  LITSSRVTNEVCSEANSTK 15
           L   +++  ++C EANSTK
Sbjct: 303 LFILAKIVTDLCQEANSTK 321


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 460 FVVLWFSSFFILKSD 504
           FV+L+F  FFI+ SD
Sbjct: 4   FVILFFGVFFIIFSD 18


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -2

Query: 92  LTRLFVILITSSRVTNEVCSEANSTK 15
           +T +F +   S R + ++C+EAN TK
Sbjct: 200 VTYVFDLFYLSKRAS-DLCNEANKTK 224


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 470 NTTKSIKKFHFIHGHKVARAPFLFY 396
           N   +  K  +IH   + RA FLF+
Sbjct: 254 NIIATYDKQFYIHNALIVRALFLFF 278


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 470 NTTKSIKKFHFIHGHKVARAPFLFY 396
           N   +  K  +IH   + RA FLF+
Sbjct: 250 NIIATYDKQFYIHNALIVRALFLFF 274


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,695
Number of Sequences: 336
Number of extensions: 2277
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)