Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0491
         (708 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031002-1|AAH31002.1|  247|Homo sapiens ATPase, H+ transporting...   113   6e-25
BC025373-1|AAH25373.1|  247|Homo sapiens ATPase, H+ transporting...   113   6e-25
BC001411-1|AAH01411.1|  247|Homo sapiens ATPase, H+ transporting...   113   6e-25
AF145316-1|AAD33953.1|  247|Homo sapiens vacuolar proton pump de...   113   6e-25
AF104629-1|AAG30726.1|  247|Homo sapiens vacuolar H-ATPase subun...   113   6e-25
AF100741-1|AAD40384.1|  247|Homo sapiens vacuolar H-ATPase subun...   113   6e-25
AF077614-1|AAG43047.1|  247|Homo sapiens vacuolar ATP synthase s...   111   3e-24
AP001759-1|BAA95497.1|   94|Homo sapiens C21orf56 protein.             31   4.0  

>BC031002-1|AAH31002.1|  247|Homo sapiens ATPase, H+ transporting,
           lysosomal 34kDa, V1 subunit D protein.
          Length = 247

 Score =  113 bits (272), Expect = 6e-25
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 4   AVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFY 183
           AV+LLVELASLQTSFVTLDE IKITNRRVNAIEHVIIPR+ERTLAYII+ELDE EREEFY
Sbjct: 141 AVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFY 200

Query: 184 R 186
           R
Sbjct: 201 R 201


>BC025373-1|AAH25373.1|  247|Homo sapiens ATPase, H+ transporting,
           lysosomal 34kDa, V1 subunit D protein.
          Length = 247

 Score =  113 bits (272), Expect = 6e-25
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 4   AVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFY 183
           AV+LLVELASLQTSFVTLDE IKITNRRVNAIEHVIIPR+ERTLAYII+ELDE EREEFY
Sbjct: 141 AVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFY 200

Query: 184 R 186
           R
Sbjct: 201 R 201


>BC001411-1|AAH01411.1|  247|Homo sapiens ATPase, H+ transporting,
           lysosomal 34kDa, V1 subunit D protein.
          Length = 247

 Score =  113 bits (272), Expect = 6e-25
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 4   AVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFY 183
           AV+LLVELASLQTSFVTLDE IKITNRRVNAIEHVIIPR+ERTLAYII+ELDE EREEFY
Sbjct: 141 AVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFY 200

Query: 184 R 186
           R
Sbjct: 201 R 201


>AF145316-1|AAD33953.1|  247|Homo sapiens vacuolar proton pump delta
           polypeptide protein.
          Length = 247

 Score =  113 bits (272), Expect = 6e-25
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 4   AVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFY 183
           AV+LLVELASLQTSFVTLDE IKITNRRVNAIEHVIIPR+ERTLAYII+ELDE EREEFY
Sbjct: 141 AVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFY 200

Query: 184 R 186
           R
Sbjct: 201 R 201


>AF104629-1|AAG30726.1|  247|Homo sapiens vacuolar H-ATPase subunit
           D protein.
          Length = 247

 Score =  113 bits (272), Expect = 6e-25
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 4   AVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFY 183
           AV+LLVELASLQTSFVTLDE IKITNRRVNAIEHVIIPR+ERTLAYII+ELDE EREEFY
Sbjct: 141 AVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFY 200

Query: 184 R 186
           R
Sbjct: 201 R 201


>AF100741-1|AAD40384.1|  247|Homo sapiens vacuolar H-ATPase subunit
           D protein.
          Length = 247

 Score =  113 bits (272), Expect = 6e-25
 Identities = 56/61 (91%), Positives = 59/61 (96%)
 Frame = +1

Query: 4   AVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFY 183
           AV+LLVELASLQTSFVTLDE IKITNRRVNAIEHVIIPR+ERTLAYII+ELDE EREEFY
Sbjct: 141 AVELLVELASLQTSFVTLDEAIKITNRRVNAIEHVIIPRIERTLAYIITELDEREREEFY 200

Query: 184 R 186
           R
Sbjct: 201 R 201


>AF077614-1|AAG43047.1|  247|Homo sapiens vacuolar ATP synthase
           subunit D homolog protein.
          Length = 247

 Score =  111 bits (266), Expect = 3e-24
 Identities = 55/61 (90%), Positives = 58/61 (95%)
 Frame = +1

Query: 4   AVKLLVELASLQTSFVTLDEVIKITNRRVNAIEHVIIPRLERTLAYIISELDELEREEFY 183
           AV+LLVELASLQTSFVTLDE IKI NRRVNAIEHVIIPR+ERTLAYII+ELDE EREEFY
Sbjct: 141 AVELLVELASLQTSFVTLDEAIKIXNRRVNAIEHVIIPRIERTLAYIITELDEREREEFY 200

Query: 184 R 186
           R
Sbjct: 201 R 201


>AP001759-1|BAA95497.1|   94|Homo sapiens C21orf56 protein.
          Length = 94

 Score = 31.1 bits (67), Expect = 4.0
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +2

Query: 260 PATTCAAGSPTCWMRAMRTCCSKSICSTPYIACL 361
           P  T +  SP    RA R  CSK +CS P   CL
Sbjct: 11  PRRTASPSSPGEPPRARRLACSKRVCSNPGPRCL 44


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,893,136
Number of Sequences: 237096
Number of extensions: 1269674
Number of successful extensions: 2677
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2674
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)