Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0488
(460 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein. 26 0.73
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 25 1.7
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 24 2.2
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 24 2.2
DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domai... 23 5.1
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 5.1
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 5.1
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 6.8
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 6.8
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 23 6.8
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 23 6.8
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 6.8
>DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein.
Length = 494
Score = 25.8 bits (54), Expect = 0.73
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -1
Query: 133 NSSRTSRRRLQATL 92
NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 24.6 bits (51), Expect = 1.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -3
Query: 443 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 348
R+R + TP+ +++PKL+ + A P+L
Sbjct: 5 RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 24.2 bits (50), Expect = 2.2
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 459 QTRHRPHPLPVQTRHAPVLRANPYSEVT 376
Q H PH Q +H P + P++ V+
Sbjct: 72 QLHHSPHQYHQQVQHQPQPPSTPFANVS 99
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 24.2 bits (50), Expect = 2.2
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -2
Query: 459 QTRHRPHPLPVQTRHAPVLRANPYSEVT 376
Q H PH Q +H P + P++ V+
Sbjct: 73 QLHHSPHQYHQQVQHQPQPPSTPFANVS 100
>DQ370037-1|ABD18598.1| 121|Anopheles gambiae putative TIL domain
polypeptide protein.
Length = 121
Score = 23.0 bits (47), Expect = 5.1
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = -3
Query: 263 PSPEFSRSAESIRTPPQMRCSSRSEPY 183
P P + + E PP++ C+ E Y
Sbjct: 39 PEPSTTEATEEESPPPKIECTDPREVY 65
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.0 bits (47), Expect = 5.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 195 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 76
F T+ Y N+ A + T G G FRP+ TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 23.0 bits (47), Expect = 5.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 195 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 76
F T+ Y N+ A + T G G FRP+ TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 22.6 bits (46), Expect = 6.8
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 171 RIPWNSNAQAEKKTLPGPLG 112
+IPW+ NA+A K G G
Sbjct: 317 QIPWDRNAEALAKWASGQTG 336
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 22.6 bits (46), Expect = 6.8
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -2
Query: 411 PVLRANPYSEVTDPICRLPLPTLFYR 334
P L S + P CRLP P L R
Sbjct: 89 PELVTRSLSNLELPSCRLPCPNLIPR 114
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 22.6 bits (46), Expect = 6.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 95 FGLPRRTLVFKDEGTI 48
FG+P++ + KD GT+
Sbjct: 1660 FGMPKQIVELKDTGTV 1675
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 22.6 bits (46), Expect = 6.8
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -3
Query: 95 FGLPRRTLVFKDEGTI 48
FG+P++ + KD GT+
Sbjct: 1661 FGMPKQIVELKDTGTV 1676
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 22.6 bits (46), Expect = 6.8
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 373 IRNFGIRIGSEDRGVSGLDGKRMRPVPG 456
I N I R VSGLD R P PG
Sbjct: 10 IGNLFIEPNRYRRIVSGLDSTRGSPAPG 37
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,095
Number of Sequences: 2352
Number of extensions: 11529
Number of successful extensions: 32
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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