Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0487
         (659 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   3.7  
DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reduct...    24   4.9  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   6.5  

>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 20/73 (27%), Positives = 28/73 (38%)
 Frame = -1

Query: 299 TTATPPFKPKRITASRTYPCGLTRGPITSKQAVDKSVITS*TSHRSAKCSLEARQSSYVG 120
           TT TP    +    +RT P    R    +    D    +S   H     +LEA  S+ V 
Sbjct: 306 TTRTPATSTEHRYTTRT-PTTTHRLAARTSTPPDPETTSSQQCHPPVNDTLEAPNSTLVS 364

Query: 119 NKKQKCRSRRPNL 81
              Q  R+  P+L
Sbjct: 365 GPPQNHRASSPHL 377


>DQ013245-1|AAY34441.1|  487|Anopheles gambiae adrenodoxin reductase
           protein.
          Length = 487

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -1

Query: 500 TFSRAAHWKKVMFFGNLTLG 441
           TF++ A   +V F GNL LG
Sbjct: 88  TFTKTAENPRVRFLGNLCLG 107


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +2

Query: 131 SSDALLASIWPIYVRSKTLSQTCLQPVYW 217
           S D  +A +WP+  R       CL  + W
Sbjct: 232 SGDRYIAIMWPLRPRITKTCSKCLIGIVW 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,347
Number of Sequences: 2352
Number of extensions: 14056
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)