Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0483
         (709 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ250440-1|CAB70093.1|   72|Drosophila melanogaster guanine nucl...   114   1e-25
AE014134-1620|AAF52760.2|   72|Drosophila melanogaster CG3694-PC...   114   1e-25
AE014134-1619|AAF52761.2|   72|Drosophila melanogaster CG3694-PB...   114   1e-25
AE014134-1618|AAF52759.2|   72|Drosophila melanogaster CG3694-PA...   114   1e-25
AE013599-2505|AAF57836.1|  844|Drosophila melanogaster CG15844-P...    40   0.004

>AJ250440-1|CAB70093.1|   72|Drosophila melanogaster guanine
           nucleotide-binding proteingamma subunit protein.
          Length = 72

 Score =  114 bits (275), Expect = 1e-25
 Identities = 48/57 (84%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   EQIENMKYQASMDRWPLSRSIAAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCIIM 171
           +QIENMKYQASM+RWPLS+SIA MR ++EENEKNDPLI+APDKKNNPWAEKGKC+IM
Sbjct: 16  KQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKNNPWAEKGKCVIM 72


>AE014134-1620|AAF52760.2|   72|Drosophila melanogaster CG3694-PC,
           isoform C protein.
          Length = 72

 Score =  114 bits (275), Expect = 1e-25
 Identities = 48/57 (84%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   EQIENMKYQASMDRWPLSRSIAAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCIIM 171
           +QIENMKYQASM+RWPLS+SIA MR ++EENEKNDPLI+APDKKNNPWAEKGKC+IM
Sbjct: 16  KQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKNNPWAEKGKCVIM 72


>AE014134-1619|AAF52761.2|   72|Drosophila melanogaster CG3694-PB,
           isoform B protein.
          Length = 72

 Score =  114 bits (275), Expect = 1e-25
 Identities = 48/57 (84%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   EQIENMKYQASMDRWPLSRSIAAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCIIM 171
           +QIENMKYQASM+RWPLS+SIA MR ++EENEKNDPLI+APDKKNNPWAEKGKC+IM
Sbjct: 16  KQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKNNPWAEKGKCVIM 72


>AE014134-1618|AAF52759.2|   72|Drosophila melanogaster CG3694-PA,
           isoform A protein.
          Length = 72

 Score =  114 bits (275), Expect = 1e-25
 Identities = 48/57 (84%), Positives = 55/57 (96%)
 Frame = +1

Query: 1   EQIENMKYQASMDRWPLSRSIAAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCIIM 171
           +QIENMKYQASM+RWPLS+SIA MR ++EENEKNDPLI+APDKKNNPWAEKGKC+IM
Sbjct: 16  KQIENMKYQASMERWPLSKSIAEMRSFIEENEKNDPLINAPDKKNNPWAEKGKCVIM 72


>AE013599-2505|AAF57836.1|  844|Drosophila melanogaster CG15844-PA
           protein.
          Length = 844

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 17/52 (32%), Positives = 32/52 (61%)
 Frame = +1

Query: 16  MKYQASMDRWPLSRSIAAMREYVEENEKNDPLIHAPDKKNNPWAEKGKCIIM 171
           ++ +  M+R P+S + + M +Y+ E+E+ D L+    +K NP+ EK  C I+
Sbjct: 793 LRREVEMERMPVSVACSLMMKYMLEHEEEDCLLSGFTQKVNPFREKSSCSIL 844


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,572,182
Number of Sequences: 53049
Number of extensions: 430399
Number of successful extensions: 1100
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3128965752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)