Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0469
(600 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot... 30 2.8
Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein. 29 3.7
Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein. 29 3.7
AY051596-1|AAK93020.1| 969|Drosophila melanogaster GH23814p pro... 29 3.7
AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,... 29 3.7
AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,... 29 3.7
AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,... 29 3.7
EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire prot... 29 6.4
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot... 29 6.4
EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire prot... 29 6.4
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot... 29 6.4
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot... 29 6.4
AE014297-4778|AAN14281.1| 1121|Drosophila melanogaster CG1815-PB... 29 6.4
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA... 29 6.4
M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lo... 28 8.4
AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p pro... 28 8.4
AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic ... 28 8.4
AE014298-3122|AAF50827.3| 395|Drosophila melanogaster CG1391-PA... 28 8.4
AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB... 28 8.4
>EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire
protein.
Length = 1349
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 340 SRNPLRSVQRLTCRSNQP*KWMALKR 417
SRNPLR +QRL + P KW+ + R
Sbjct: 479 SRNPLRKLQRLKYLTPPPLKWVPIAR 504
>Y18278-2|CAC18800.1| 3347|Drosophila melanogaster AKAP550 protein.
Length = 3347
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 121 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 294
NDLN + F WV T N E+ DL +++PS +S+ GA+ ++R+ + SWD+
Sbjct: 2712 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2767
>Y18278-1|CAC18799.1| 3554|Drosophila melanogaster AKAP550 protein.
Length = 3554
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 121 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 294
NDLN + F WV T N E+ DL +++PS +S+ GA+ ++R+ + SWD+
Sbjct: 2919 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2974
>AY051596-1|AAK93020.1| 969|Drosophila melanogaster GH23814p
protein.
Length = 969
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 121 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 294
NDLN + F WV T N E+ DL +++PS +S+ GA+ ++R+ + SWD+
Sbjct: 334 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 389
>AE014298-711|AAN09135.1| 3522|Drosophila melanogaster CG6775-PB,
isoform B protein.
Length = 3522
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 121 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 294
NDLN + F WV T N E+ DL +++PS +S+ GA+ ++R+ + SWD+
Sbjct: 2887 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 2942
>AE014298-710|AAF46011.2| 3584|Drosophila melanogaster CG6775-PA,
isoform A protein.
Length = 3584
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 121 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 294
NDLN + F WV T N E+ DL +++PS +S+ GA+ ++R+ + SWD+
Sbjct: 2949 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 3004
>AE014298-705|ABI30968.1| 3719|Drosophila melanogaster CG6775-PC,
isoform C protein.
Length = 3719
Score = 29.5 bits (63), Expect = 3.7
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +1
Query: 121 NDLNLFSNFKWVRTPAYSNDEAGDL-MTVPSGPILVSR-TGAVG*TKRSVKAPKKRSWDT 294
NDLN + F WV T N E+ DL +++PS +S+ GA+ ++R+ + SWD+
Sbjct: 3084 NDLNQYPIFPWVLT----NYESKDLDLSLPSNYRDLSKPIGALNPSRRAYFEERYESWDS 3139
>EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire
protein.
Length = 637
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 340 SRNPLRSVQRLTCRSNQP*KWMALKR 417
S+NPLR +QRL + P KW+ + R
Sbjct: 477 SKNPLRKLQRLKYLTPPPLKWVPIAR 502
>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
protein.
Length = 1396
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 340 SRNPLRSVQRLTCRSNQP*KWMALKR 417
S+NPLR +QRL + P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire
protein.
Length = 839
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 340 SRNPLRSVQRLTCRSNQP*KWMALKR 417
S+NPLR +QRL + P KW+ + R
Sbjct: 28 SKNPLRKLQRLKYLTPPPLKWVPIAR 53
>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
protein.
Length = 1437
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 340 SRNPLRSVQRLTCRSNQP*KWMALKR 417
S+NPLR +QRL + P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
protein.
Length = 1659
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 340 SRNPLRSVQRLTCRSNQP*KWMALKR 417
S+NPLR +QRL + P KW+ + R
Sbjct: 789 SKNPLRKLQRLKYLTPPPLKWVPIAR 814
>AE014297-4778|AAN14281.1| 1121|Drosophila melanogaster CG1815-PB,
isoform B protein.
Length = 1121
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 341 LPWPPSCCHERPTPFMVSHERFLGALTLRLVHPTAPVLLTK 219
+P PP +P RF+G T++ V+P P+ LT+
Sbjct: 1012 MPPPPPLPPREESPATADSVRFVGDTTIQRVYPRHPLQLTR 1052
>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
protein.
Length = 1782
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 340 SRNPLRSVQRLTCRSNQP*KWMALKR 417
S+NPLR +QRL + P KW+ + R
Sbjct: 751 SKNPLRKLQRLKYLTPPPLKWVPIAR 776
>M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lobes
protein protein.
Length = 1597
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 277 KRSWD-TMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 390
KR ++ T+ + RS +D GHG PLR V L Q
Sbjct: 332 KRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p
protein.
Length = 1593
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 277 KRSWD-TMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 390
KR ++ T+ + RS +D GHG PLR V L Q
Sbjct: 332 KRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic
lobes protein.
Length = 1597
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 277 KRSWD-TMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 390
KR ++ T+ + RS +D GHG PLR V L Q
Sbjct: 332 KRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AE014298-3122|AAF50827.3| 395|Drosophila melanogaster CG1391-PA,
isoform A protein.
Length = 395
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 277 KRSWD-TMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 390
KR ++ T+ + RS +D GHG PLR V L Q
Sbjct: 332 KRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB,
isoform B protein.
Length = 1594
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 277 KRSWD-TMKGVGRS*QQDGGHGSRNPLRSVQRLTCRSNQ 390
KR ++ T+ + RS +D GHG PLR V L Q
Sbjct: 332 KRKYNFTITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,720,745
Number of Sequences: 53049
Number of extensions: 589341
Number of successful extensions: 1249
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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