Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0464
(685 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 25 0.58
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 23 1.8
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 2.3
DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7 prot... 23 3.1
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 22 4.1
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 22 5.4
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 7.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 7.1
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 9.4
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 25.0 bits (52), Expect = 0.58
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 299 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 394
+VT+W + E+I++ +L V PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 23.4 bits (48), Expect = 1.8
Identities = 9/33 (27%), Positives = 16/33 (48%)
Frame = +3
Query: 504 TRPVVPPVSCWTPATVSPTPCPSTRIRTPPRHP 602
T + P ++CW+ + P P + TP + P
Sbjct: 314 TTVMSPTINCWSLTSSPPPPYQISAQPTPSQSP 346
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 23.0 bits (47), Expect = 2.3
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = +3
Query: 447 SKHSTRPPCTSPSKPC-SRCTRPVVPPVSCWTPATVSPTPCPSTRIRTPPRHPASGLGRS 623
S+ +T P SK + R V P TP+T + P + + +P G
Sbjct: 195 SRTTTSPTKVKASKASPAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQSYRPTGNI 254
Query: 624 *PH 632
PH
Sbjct: 255 TPH 257
>DQ659247-1|ABG47445.1| 980|Tribolium castaneum chitinase 7
protein.
Length = 980
Score = 22.6 bits (46), Expect = 3.1
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +1
Query: 415 GQQREDDPDHVRNIQHARHVRRHPSRA 495
GQ DP+ V + H+ HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 22.2 bits (45), Expect = 4.1
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +1
Query: 268 PDPQIPHRTRNRH 306
PD +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.8 bits (44), Expect = 5.4
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +3
Query: 558 TPCPSTRIRTPPRHPASG 611
TP S+ PP HP SG
Sbjct: 64 TPNKSSTSPYPPNHPLSG 81
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.1
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = -3
Query: 383 RGVPRGRHAAHCRRYDAKSSP 321
RG P AA C + KS P
Sbjct: 33 RGTPLAMLAAQCNKLSNKSPP 53
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 337 MPNLLHVIPVSDDSVFD 287
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 337 MPNLLHVIPVSDDSVFD 287
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 337 MPNLLHVIPVSDDSVFD 287
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 7.1
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = -1
Query: 337 MPNLLHVIPVSDDSVFD 287
+P++ +IP DD+ D
Sbjct: 355 LPDISEIIPTGDDTTMD 371
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.4
Identities = 9/33 (27%), Positives = 13/33 (39%)
Frame = -1
Query: 565 HGVGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 467
HG V G+ ++ +H LD D G
Sbjct: 600 HGYAFNVVGIGRSPDQNVKKINLKHALDLDRRG 632
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,928
Number of Sequences: 336
Number of extensions: 4193
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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