Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0463
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.48 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    25   0.48 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   1.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.8  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 18/74 (24%), Positives = 33/74 (44%)
 Frame = -3

Query: 240 QYNWHDCFVCKYI*IHINLYVFYIKCTYLKKILIRLSVCLETYTLYPLTHLMCTHENALA 61
           +Y+W   F+ ++I +  N  V  ++C          +   E +T Y L ++   H  AL 
Sbjct: 155 RYSWAKVFLVEHILVQTNKLVLALECN---------NTTAEGFT-YFLGNMSFAHIFALV 204

Query: 60  HYNYIKTIFVQESN 19
            Y+  K + +Q  N
Sbjct: 205 EYDIFKALVLQTIN 218


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 18/74 (24%), Positives = 33/74 (44%)
 Frame = -3

Query: 240 QYNWHDCFVCKYI*IHINLYVFYIKCTYLKKILIRLSVCLETYTLYPLTHLMCTHENALA 61
           +Y+W   F+ ++I +  N  V  ++C          +   E +T Y L ++   H  AL 
Sbjct: 155 RYSWAKVFLVEHILVQTNKLVLALECN---------NTTAEGFT-YFLGNMSFAHIFALV 204

Query: 60  HYNYIKTIFVQESN 19
            Y+  K + +Q  N
Sbjct: 205 EYDIFKALVLQTIN 218


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +3

Query: 138 ESVFFLNKYILYKTHINLYVFIYIYTQNNRANYI 239
           E + ++NK    K  INLY   Y + ++ R +Y+
Sbjct: 105 EILGYVNKAKFGKLLINLYTINYNFKESERNDYV 138



 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +3

Query: 105 IMYKFLNKQTNESVFFLNKYILYKTHINLYVFIYIYTQNNRANYI 239
           I Y F   + N+ V  L    ++   I L+   YIY   + A+ I
Sbjct: 125 INYNFKESERNDYVSLLQLVFVFCYFIYLFTVYYIYYSVHEASII 169


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 186 NLYVFIYIYTQNNRANY 236
           +LYV +YI   NN+A Y
Sbjct: 231 DLYVTLYIILTNNQAKY 247


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = -2

Query: 193 YKFICVLYKMYLFKKNTDS 137
           + F C+L+ +YL+ + T +
Sbjct: 13  FSFCCILFFIYLYWQQTSN 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,517
Number of Sequences: 336
Number of extensions: 4224
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)