Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0463
         (731 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          26   1.4  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   1.8  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   7.4  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.7  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 23/67 (34%), Positives = 29/67 (43%)
 Frame = -3

Query: 279 DSHIKI*VPTLFVQYNWHDCFVCKYI*IHINLYVFYIKCTYLKKILIRLSVCLETYTLYP 100
           DS I +  P    +Y WH   VCK I    NL +F          L+  SV +    +Y 
Sbjct: 391 DSSIFVQSPNCNQRYGWHPATVCK-IPPGCNLKIFN---NQEFATLLSQSVSMGFEAVYQ 446

Query: 99  LTHLMCT 79
           LT  MCT
Sbjct: 447 LTR-MCT 452


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 572 FCSVLLEGTYESDYLLKYVLYKNS 501
           FC++L+ GT+   Y LK  L++NS
Sbjct: 662 FCTILMFGTFSLAYYLK--LFRNS 683


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +3

Query: 171  YKTHINLYVFIYIYTQNNRANYIVQ 245
            Y  H   +VFIY+  ++ R  +I++
Sbjct: 1601 YGCHDRAHVFIYLIREDQRVKFILR 1625


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +3

Query: 114 KFLNKQTNESVFFLNKYILYKTHINLYVFIYI 209
           +F +++ N S  F+ K I  +  +NL VF+ +
Sbjct: 128 RFEHERNNRSREFMLKLIAIRMLVNLVVFVIL 159


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,987
Number of Sequences: 2352
Number of extensions: 14966
Number of successful extensions: 61
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)