Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0460
(605 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Triboliu... 24 0.86
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 24 0.86
AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450 ... 23 1.5
AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory recept... 23 2.0
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 23 2.6
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 23 2.6
U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II p... 22 3.5
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 4.6
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 4.6
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 22 4.6
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 21 6.1
>X06905-1|CAA30009.1| 489|Tribolium castaneum protein ( Tribolium
castaneum mRNAfor alhpa amylase 3'region. ).
Length = 489
Score = 24.2 bits (50), Expect = 0.86
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2
Query: 325 EWTWSSVGRDVESFSTTKPSGVLEVA 248
EW WS + + E F K G ++++
Sbjct: 34 EWKWSDIADECERFLAPKGFGGVQIS 59
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 24.2 bits (50), Expect = 0.86
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -2
Query: 325 EWTWSSVGRDVESFSTTKPSGVLEVA 248
EW WS + + E F K G ++++
Sbjct: 35 EWKWSDIADECERFLAPKGFGGVQIS 60
>AF263514-1|AAF74206.1| 127|Tribolium castaneum cytochrome P450
monooxygenase protein.
Length = 127
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 122 LKYI*SCFHYDISYFAPVPILQR 54
+KY+ C + F PVPI+ R
Sbjct: 45 MKYLERCLMETLRMFPPVPIIAR 67
>AM292363-1|CAL23175.2| 347|Tribolium castaneum gustatory receptor
candidate 42 protein.
Length = 347
Score = 23.0 bits (47), Expect = 2.0
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +3
Query: 12 VSSFFFFFQRILSCALKDRYRGKIRNV 92
V +F F+ C + +RGK RN+
Sbjct: 150 VQLYFQFYYTYFLCVIVCIFRGKYRNI 176
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 124 TSNTFNPVFTMTFLILPLYLS 62
T + FN +F +FL+ LY S
Sbjct: 270 TIDAFNDIFGWSFLLFTLYSS 290
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 22.6 bits (46), Expect = 2.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 124 TSNTFNPVFTMTFLILPLYLS 62
T + FN +F +FL+ LY S
Sbjct: 196 TIDAFNDIFGWSFLLFTLYSS 216
>U04271-2|AAA03709.1| 490|Tribolium castaneum alpha-amylase II
protein.
Length = 490
Score = 22.2 bits (45), Expect = 3.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -2
Query: 325 EWTWSSVGRDVESFSTTKPSGVLEVA 248
EW WS + E F K G ++++
Sbjct: 35 EWKWSDIADVCERFLAPKGFGGVQIS 60
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 231 GVLGGAATSRTPDGFVVEKDSTSL 302
G L G ++ +P G V+ STS+
Sbjct: 685 GALSGLSSLTSPGGMVLPSPSTSV 708
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 231 GVLGGAATSRTPDGFVVEKDSTSL 302
G L G ++ +P G V+ STS+
Sbjct: 577 GALSGLSSLTSPGGMVLPSPSTSV 600
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 21.8 bits (44), Expect = 4.6
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3
Query: 351 PNYGSACGAAPTGRSYV 401
P +GS CG + + +Y+
Sbjct: 18 PGFGSTCGGSSSSMAYL 34
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 240 GGAATSRTPDGFVVEKDSTSLPT 308
G + S TP ++ STS PT
Sbjct: 73 GAPSPSSTPSSLPTQRTSTSNPT 95
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,171
Number of Sequences: 336
Number of extensions: 3196
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15352827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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