Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0460
         (605 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin rece...    26   1.1  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    23   5.8  
L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.     23   7.7  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   7.7  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    23   7.7  

>AY345586-1|AAR09143.1|  427|Anopheles gambiae myosuppressin
           receptor protein.
          Length = 427

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 112 FNPVFTMTFLILPLYLSFNAQLNI 41
           F+      FL +P+YLSF+ Q N+
Sbjct: 180 FSSYVVCPFLAVPIYLSFSIQSNV 203


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = +1

Query: 193 YELENTKGVKFLMEFWVVQPLQGRLMVSSL 282
           Y+  N +  +FL  ++ + PL+G  ++  +
Sbjct: 210 YDYANRRAWRFLHNYFFLNPLEGDYLIQGI 239


>L04753-1|AAA29357.1|  511|Anopheles gambiae alpha-amylase protein.
          Length = 511

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 391 RPVGAAPHADP*L--GPGIFRNSREWTWSSVGRDVESFSTTKPSGVLEVA 248
           RPV AA H DP    G     +  EW WS +  + E F   K  G ++++
Sbjct: 18  RPV-AAQH-DPHFVRGHSTIVHLFEWKWSDIADECERFLGPKGYGGVQLS 65


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +1

Query: 298 LYPQTTRS--IRGCFGISLDLTTDRHAVRRP 384
           +YP  T++  +  C G++L    D H V+ P
Sbjct: 60  IYPNDTQTQCMVRCMGLNLGWWNDTHGVQEP 90


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
 Frame = +1

Query: 298 LYPQTTRS--IRGCFGISLDLTTDRHAVRRP 384
           +YP  T++  +  C G++L    D H V+ P
Sbjct: 60  IYPNDTQTQCMVRCMGLNLGWWNDTHGVQEP 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 628,912
Number of Sequences: 2352
Number of extensions: 11874
Number of successful extensions: 27
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58870980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)