Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0460
         (605 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11837-1|CAA72535.1|  729|Drosophila melanogaster bZIP transcrip...    29   3.7  
BT030402-1|ABO52821.1|  610|Drosophila melanogaster FI01009p pro...    29   3.7  
AY113444-1|AAM29449.1|  596|Drosophila melanogaster RE29005p pro...    29   3.7  
AE014134-906|AAN10539.1|  610|Drosophila melanogaster CG14029-PC...    29   3.7  
AE014134-905|AAF52237.1|  729|Drosophila melanogaster CG14029-PA...    29   3.7  

>Y11837-1|CAA72535.1|  729|Drosophila melanogaster bZIP
           transcription factor protein.
          Length = 729

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 279 VEKDSTSLPTDDQVHSRLFRNIPGPNYGSACGAAPTG 389
           VEK   SLPT +QV S   R     + GS+ G++P+G
Sbjct: 302 VEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSG 338


>BT030402-1|ABO52821.1|  610|Drosophila melanogaster FI01009p
           protein.
          Length = 610

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 279 VEKDSTSLPTDDQVHSRLFRNIPGPNYGSACGAAPTG 389
           VEK   SLPT +QV S   R     + GS+ G++P+G
Sbjct: 183 VEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSG 219


>AY113444-1|AAM29449.1|  596|Drosophila melanogaster RE29005p
           protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 279 VEKDSTSLPTDDQVHSRLFRNIPGPNYGSACGAAPTG 389
           VEK   SLPT +QV S   R     + GS+ G++P+G
Sbjct: 183 VEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSG 219


>AE014134-906|AAN10539.1|  610|Drosophila melanogaster CG14029-PC,
           isoform C protein.
          Length = 610

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 279 VEKDSTSLPTDDQVHSRLFRNIPGPNYGSACGAAPTG 389
           VEK   SLPT +QV S   R     + GS+ G++P+G
Sbjct: 183 VEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSG 219


>AE014134-905|AAF52237.1|  729|Drosophila melanogaster CG14029-PA,
           isoform A protein.
          Length = 729

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +3

Query: 279 VEKDSTSLPTDDQVHSRLFRNIPGPNYGSACGAAPTG 389
           VEK   SLPT +QV S   R     + GS+ G++P+G
Sbjct: 302 VEKILASLPTSEQVLSNTKRAKMSGSGGSSSGSSPSG 338


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,891,197
Number of Sequences: 53049
Number of extensions: 530824
Number of successful extensions: 1178
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1178
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)