Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0459
(533 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12441| Best HMM Match : Ribosomal_L18p (HMM E-Value=0) 209 9e-55
SB_35225| Best HMM Match : Ribosomal_L18p (HMM E-Value=4e-30) 51 7e-07
SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.021
SB_22016| Best HMM Match : HSP90 (HMM E-Value=0) 35 0.036
SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.036
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 32 0.26
SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81) 31 0.45
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_35415| Best HMM Match : BRF1 (HMM E-Value=4.4) 30 1.0
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1) 30 1.0
SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1) 30 1.4
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 1.8
SB_28851| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_26485| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06) 29 2.4
SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61) 29 2.4
SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019) 29 2.4
SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10) 29 2.4
SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09) 29 2.4
SB_45437| Best HMM Match : Ribosomal_L15e (HMM E-Value=0.53) 29 3.2
SB_53951| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07) 28 4.2
SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042) 28 4.2
SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 28 4.2
SB_6510| Best HMM Match : Vicilin_N (HMM E-Value=0.44) 28 5.5
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_51415| Best HMM Match : zf-CCCH (HMM E-Value=1.1) 27 7.3
SB_50343| Best HMM Match : MAP (HMM E-Value=3.4) 27 7.3
SB_20018| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_14664| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.3
SB_9039| Best HMM Match : M (HMM E-Value=0.00046) 27 7.3
SB_35735| Best HMM Match : FF (HMM E-Value=2.29995e-41) 27 9.6
SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05) 27 9.6
SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_12441| Best HMM Match : Ribosomal_L18p (HMM E-Value=0)
Length = 328
Score = 209 bits (511), Expect = 9e-55
Identities = 98/142 (69%), Positives = 123/142 (86%)
Frame = +3
Query: 30 LTRTTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKKFNAEVHRAHIFGLHVAEYMR 209
L RT+TGARVFGA+KGAVDGGL +PHS+KRFPGYD+ESK F+AEVHR HIFG HVAEYMR
Sbjct: 182 LARTSTGARVFGALKGAVDGGLEIPHSMKRFPGYDSESKDFSAEVHRNHIFGKHVAEYMR 241
Query: 210 SLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 389
SL ++DE+S+KRQFS YIK GV AD+IE IYK AH+AIRADP HKK E KKD V+ KR++
Sbjct: 242 SLAEEDEESYKRQFSAYIKNGVDADSIEGIYKAAHQAIRADPVHKKAE-KKD-VQLKRFH 299
Query: 390 KRKLTLAERKNRIKQKKASFIK 455
++K++ +R +R+KQKKA+F++
Sbjct: 300 RKKMSRQQRVDRVKQKKAAFLR 321
>SB_35225| Best HMM Match : Ribosomal_L18p (HMM E-Value=4e-30)
Length = 113
Score = 50.8 bits (116), Expect = 7e-07
Identities = 21/26 (80%), Positives = 24/26 (92%)
Frame = +3
Query: 30 LTRTTTGARVFGAMKGAVDGGLNVPH 107
L RT+TGARVFGA+KGAVDGGL +PH
Sbjct: 87 LARTSTGARVFGALKGAVDGGLEIPH 112
>SB_23345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 903
Score = 35.9 bits (79), Expect = 0.021
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +3
Query: 204 MRSLEQDDEDSFKRQFSKYI----KLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSV 371
++ EQ ++ FK++ + Y+ K G T D IE KK H D HK+ KK
Sbjct: 345 VKFFEQKQKEEFKKEETDYLDVFKKGGTTKDKIEKKDKKKHHKKHKDKEHKEHHHKKKRS 404
Query: 372 KQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAEA 479
K + +K+ K K + ++ + + EA
Sbjct: 405 HSKTSSTTDEEKERKKSETKNKDSEDEEKERKKREA 440
>SB_22016| Best HMM Match : HSP90 (HMM E-Value=0)
Length = 581
Score = 35.1 bits (77), Expect = 0.036
Identities = 21/87 (24%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Frame = +3
Query: 216 EQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELK--KDSVKQKRWN 389
+QD+ F QF K +KLG+ D++ K + +R S EL KD V + + N
Sbjct: 361 DQDNYKKFYEQFGKNLKLGIHEDSVNR--AKLADLLRYHSSSSGDELTSLKDYVTRMKEN 418
Query: 390 KRKLTLAERKNRIKQKKASFIKRLQAQ 470
++ + +++ + ++F++R++++
Sbjct: 419 QKDIYFITGESKDQVSHSAFVERVKSR 445
>SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 35.1 bits (77), Expect = 0.036
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +3
Query: 285 AIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQ 464
A EA+Y +A P+ KKK+ KK K+K+ K+K ++K + K+KK K+ +
Sbjct: 135 AAEALY----QAFPQPPTKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 190
Query: 465 AQAE 476
+ E
Sbjct: 191 EEEE 194
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = +3
Query: 279 ADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 440
A+A+ + + + KKK+ KK K+K+ K+K ++K + K+KK
Sbjct: 136 AEALYQAFPQPPTKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 189
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 32.3 bits (70), Expect = 0.26
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +3
Query: 207 RSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRW 386
++L Q +E +R +K K + +EA KK E + +KKE K+ K++R
Sbjct: 320 KALRQKEEKEKQRLEAKAAK---EKERLEAKQKKEQERLEKQAEKEKKE-KERLEKKQRE 375
Query: 387 NKRKLTLAERKNRIKQKK 440
K +L E+K K+KK
Sbjct: 376 EKDRLEKKEKKEEEKRKK 393
>SB_37866| Best HMM Match : CDC37 (HMM E-Value=0.81)
Length = 461
Score = 31.5 bits (68), Expect = 0.45
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 204 MRSLEQDDEDSFKRQFSKYIKLGVTADAIEA--IYK--KAHEAIRADPSHKKKELKKDSV 371
M+ + +DS KR+ + GV I+ + K +AH+ A P +KKK KK+
Sbjct: 255 MKKGSKQAKDSAKRKTTVVTSAGVIKKPIKLAKVMKMIRAHKLTPAKPVNKKKNDKKEQT 314
Query: 372 KQKRWNKRKLTLAERKNRIKQKKASFIK 455
+QK K K+ + K++ K K +K
Sbjct: 315 QQKE-KKNKIN-NDVKSKSKSKIVKILK 340
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 30.7 bits (66), Expect = 0.78
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 294 AIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 440
A +K + R H+ K K++SVK KR KRK +RK++ K K
Sbjct: 204 AKHKHKRKRKRESAKHRLKR-KRESVKHKRKQKRKSAKHKRKHKRKSDK 251
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 30.7 bits (66), Expect = 0.78
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 324 RADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 458
R + KKK+ KK K+K+ K+K +KN+ K KK +K+
Sbjct: 14 REEKKRKKKKQKKKKKKKKK-KKKKKNKKNKKNKNKNKKKKKMKK 57
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 300 YKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 440
Y++ + + KKK+ KK K+ + NK+ ++K ++K+KK
Sbjct: 13 YREEKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKK 59
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +3
Query: 321 IRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAE 476
+R + +KK KK K+K+ K+K +KN+ + K K+++ + E
Sbjct: 9 MRREYREEKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKKKKE 60
>SB_35415| Best HMM Match : BRF1 (HMM E-Value=4.4)
Length = 408
Score = 30.3 bits (65), Expect = 1.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 276 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTL 407
T D + + K+ EA + K+ ++D ++K+WNKR+ L
Sbjct: 38 TEDRMNHLMKQKTEAAKKQRISNKQARQEDQEERKKWNKRQAVL 81
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 30.3 bits (65), Expect = 1.0
Identities = 23/95 (24%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Frame = +3
Query: 198 EYMRSLEQDDEDSFKRQFSKYIKLG-VTADAIEAIYKKAHEAIRADPSHKKKELKKDSVK 374
EY R Q +E F R+ + + G V A ++ Y + + + K KEL+K+ K
Sbjct: 282 EYAREKAQLEESYF-REKEDFQRSGLVQASEVKESYNREKQELEESYKQKIKELQKNFAK 340
Query: 375 QKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAEA 479
+K+ + + E++N + + F ++++++ EA
Sbjct: 341 EKQEIEDEYA-HEKENIRAELENEFSEKIKSENEA 374
>SB_47629| Best HMM Match : Vicilin_N (HMM E-Value=1.1)
Length = 599
Score = 30.3 bits (65), Expect = 1.0
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +3
Query: 234 SFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 413
S ++S + G D E +K + +KKE KK+ K+K+ ++K E
Sbjct: 16 SIDGRWSSKTRKGGKRDEREQEREKKERRKKERKKERKKERKKERKKEKKKERKKERKEE 75
Query: 414 RKNRIKQKKASF 449
RK K+ + F
Sbjct: 76 RKKERKKAEKKF 87
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 315 EAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQ 464
E R +KKE KK+ K+++ ++K ERK K+++ K+ +
Sbjct: 35 EQEREKKERRKKERKKERKKERKKERKKEKKKERKKERKEERKKERKKAE 84
Score = 28.3 bits (60), Expect = 4.2
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 342 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAEA 479
+KKE KK+ K+++ K+K ERK K+++ K+ E+
Sbjct: 48 RKKERKKERKKERKKEKKKERKKERKEERKKERKKAEKKFTDSNES 93
>SB_56509| Best HMM Match : Ebp2 (HMM E-Value=2.1)
Length = 298
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 132 DAESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIK 266
D+ K+ NAE+ RA +++ ++S D+E + R+F + K
Sbjct: 157 DSSVKRGNAEIRRARFRATTISQVVQSFRSDEERNSVRKFIAHYK 201
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.5 bits (63), Expect = 1.8
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +3
Query: 192 VAEYMRSLEQDDEDSFKRQFSKYIKL------GVTADAIEAIYKKAHEAIRADPSHKKKE 353
VA++ ++ + K++F K +KL +++D I+ + A+ H+ +E
Sbjct: 545 VAQFSCCEVEEAWEELKQKFFKAVKLFGEDPKNLSSDQFFGIFNVFLVSF-AEAKHQNEE 603
Query: 354 LKKDSVKQKRWNKRKLTLAERKNRIKQKKA 443
+KK ++R KR+ LAE+K R +QK A
Sbjct: 604 IKKKKEAEER--KRR-ALAEQKERDRQKSA 630
>SB_28851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 330 DPSHKKKELKKDSVKQKRWNKRK-LTLAERKNRIKQKKA 443
+ S KKELK D+ K+ NKRK + +E K KKA
Sbjct: 129 ETSESKKELKSDTKSVKKANKRKTMNESESTKTKKPKKA 167
>SB_26485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 801
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 276 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTL 407
T D + + K+ EA + K+ ++D ++K+WNKR+ L
Sbjct: 712 TEDRMNHLMKQKTEAAKKQRICNKQARQEDQEERKKWNKRQAVL 755
>SB_46988| Best HMM Match : HEAT (HMM E-Value=8.6e-06)
Length = 1231
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/62 (25%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +3
Query: 297 IYKKAHEAIRADPSHKKKELKKDSVKQKRWN-KRKLTLAERKNRIKQKKASFIKRLQAQA 473
+YKK IR + KKE ++ ++QK+ +R+ AE + ++K+ ++L+ +
Sbjct: 1135 VYKKGEVLIRELDGYNKKERAREKMRQKQLRLQREREEAEHQEAERKKEEEAKQKLKQKE 1194
Query: 474 EA 479
+A
Sbjct: 1195 DA 1196
Score = 27.9 bits (59), Expect = 5.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 297 IYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQ 434
+ ++ EA + KK+E K +KQK ++KL ER+ +Q
Sbjct: 1166 LQREREEAEHQEAERKKEEEAKQKLKQKEDARKKLEEVERRKSQQQ 1211
>SB_45590| Best HMM Match : Syntaxin (HMM E-Value=0.61)
Length = 315
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 276 TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 413
T DAI+A K+ +E D + K +K K + W + ++ LA+
Sbjct: 232 TCDAIKAYLKQVYEEEFYDDIEQSKPIKDPKSKDQLWTEVEMILAQ 277
>SB_34899| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.00019)
Length = 1136
Score = 29.1 bits (62), Expect = 2.4
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +3
Query: 252 SKYIKLGVTADAIEAIYKKAHEAIR-ADPSHKKKELKKDSVKQKR---WNKRKLTLAERK 419
S+Y + D +E + EA+R + +H++ K S ++R W K+K + E
Sbjct: 397 SEYSRTTERVDHLEDVLANKEEALRNSQDAHEQTVAKLSSAIKERETSWKKQKAEIEEHY 456
Query: 420 NRIKQKKASFIKRLQAQAE 476
N+I + K+ Q A+
Sbjct: 457 NKIINDLQNRTKKTQNLAD 475
>SB_23704| Best HMM Match : Utp14 (HMM E-Value=2.1e-10)
Length = 574
Score = 29.1 bits (62), Expect = 2.4
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +3
Query: 216 EQDDEDSFKRQFSKYIKLGV--TADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWN 389
E+DD+D F+ Q +K G T + K A E A P+ K+KE KK K+K +
Sbjct: 348 EKDDDDDFELQLAKPEPEGKKGTKRGKKKTSKDATEESEA-PNKKRKEKKKKKKKKKASS 406
Query: 390 K 392
K
Sbjct: 407 K 407
>SB_11458| Best HMM Match : GTP_CDC (HMM E-Value=2.6e-09)
Length = 337
Score = 29.1 bits (62), Expect = 2.4
Identities = 26/93 (27%), Positives = 45/93 (48%)
Frame = +3
Query: 198 EYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQ 377
EYM QD E+ +++F + +K D E KKA + + A H LKK ++
Sbjct: 241 EYMSQF-QDKEEKMRQRFVQKVK-----DK-ENELKKAEQELHAKFDH----LKKVQAEE 289
Query: 378 KRWNKRKLTLAERKNRIKQKKASFIKRLQAQAE 476
K+ + K + E + + +K+ + QAQA+
Sbjct: 290 KKKLEEKRKMLEEEMSLFEKQKAAANTAQAQAQ 322
>SB_45437| Best HMM Match : Ribosomal_L15e (HMM E-Value=0.53)
Length = 273
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 252 SKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIK 431
S++I L D + + KKAH + P E ++ K+ KR LAE RI+
Sbjct: 16 SQHITLSNPPDVKKTLQKKAHHSKVVHPKKHHSEENDETDKEHVRRKRHPDLAEMLRRIQ 75
Query: 432 Q 434
+
Sbjct: 76 R 76
>SB_53951| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 342 KKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 440
KKK+ KK K+K+ NK+K+ E K ++++
Sbjct: 115 KKKKKKKKKKKKKKINKKKINKVEEKEEGEEEE 147
>SB_36664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 725
Score = 28.3 bits (60), Expect = 4.2
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +3
Query: 216 EQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAH-EAIRADPSHKKKELKKDSVKQKRWNK 392
E +DE+ ++Q K + +A + K + I A H K E +K++ KQ+ K
Sbjct: 255 EDEDENEVEKQEEFERKYNFRFEEPDAAFIKTYPRTISASVRH-KDERRKEARKQREERK 313
Query: 393 RKLTLAERKNRIKQKKASFIKRLQAQAE 476
+K +++ IK+ K K +Q + E
Sbjct: 314 KK-EKEQKREEIKRMKNLKRKEIQDKLE 340
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.3 bits (60), Expect = 4.2
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +3
Query: 195 AEYMRSLE-QDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDSV 371
+E SL+ +D D S +L + + + +K IR PS +++ L K
Sbjct: 3097 SELSPSLDIKDMRDKLTHCESLVCELNTQKEYVNQLSEKVKSIIRVSPSQRRENLDKLKN 3156
Query: 372 KQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQ 470
W K+ + LA +KKA +K +Q Q
Sbjct: 3157 VADLW-KKAIRLA------NEKKADLVKGIQQQ 3182
>SB_22653| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 737
Score = 28.3 bits (60), Expect = 4.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +3
Query: 339 HKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKK 440
HK K+ K++ K++R + K +ERK ++KK
Sbjct: 191 HKDKKKKREESKERRRHSDKAEKSERKREKEEKK 224
>SB_18961| Best HMM Match : zf-U1 (HMM E-Value=0.07)
Length = 844
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 263 KTRSHCRCY*SHLQESP*SHPCGSIPQEERVKERLGQTEALEQTQANIGREEKQ 424
K R H + Y ++ + P S+ I + + + + LGQ+E E + EEK+
Sbjct: 611 KARKHQKNYRQYVIDHP-SYEANQIKRNKELSDMLGQSEGQEMLLYEVEDEEKR 663
>SB_12151| Best HMM Match : AAA_5 (HMM E-Value=0.00042)
Length = 4607
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 357 KKDSVKQKRWNKRKLTLAERKNRIKQK 437
+KD + RW+KR +L + K R+K+K
Sbjct: 709 EKDLSLRSRWSKRVHSLIDEKTRVKEK 735
>SB_57348| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 719
Score = 28.3 bits (60), Expect = 4.2
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
Frame = +3
Query: 123 PGYDAES-KKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLG-VTADAIEA 296
P D++S KK + ++ I + +S ++ D+ S KR K++K + + A
Sbjct: 168 PCCDSKSTKKPSKSSKKSEIAKSEKHKSAKSHDKKDK-SPKRHEEKHVKKSSIPTKKVVA 226
Query: 297 IYKKAHEAIRADPSHKK--KELKKDSVKQKRWNKRKLTLAERKNRIKQKKA 443
+ KKA + D +HK + K K +K K+ + + K K A
Sbjct: 227 VVKKAKSNTKKDSAHKPVISKSPKPKAMSKTKSKHKIAKKGKSGKAKDKAA 277
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Frame = +2
Query: 341 QEERVKERLGQTEALEQTQANI---GREEKQNQAKE 439
QEE + E+ GQ + LEQT+ + G +KQ +KE
Sbjct: 2250 QEEELDEQAGQIQILEQTKLRLEMAGERDKQLISKE 2285
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 28.3 bits (60), Expect = 4.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 142 DSAS*PGNLLME*GTLRPPSTAPFIAPKTRAPV 44
D+ P +M T+RPP T F+ T+APV
Sbjct: 1653 DTTVAPETTVMPDTTMRPPKTDVFVTEATKAPV 1685
>SB_6510| Best HMM Match : Vicilin_N (HMM E-Value=0.44)
Length = 270
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/96 (21%), Positives = 39/96 (40%)
Frame = +3
Query: 189 HVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDS 368
H+ E + E+ +R+ IK G + I A+ + ++ K+ +KD
Sbjct: 17 HLEEEEEQKIAELEEEMEREKQAKIKAGASESEINALMAE----LQRQQDTKRMAFQKDI 72
Query: 369 VKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAE 476
+Q+R K +L RK +Q + + AE
Sbjct: 73 ERQRRLAKERLEARRRKRDEQQYEEDMAVSIVTMAE 108
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 27.9 bits (59), Expect = 5.5
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 6/59 (10%)
Frame = +3
Query: 282 DAIEAIYKKAHEAI--RADPSHKKKELKKDSVKQKRWNK---RKLT-LAERKNRIKQKK 440
+ IEA+ K+A I R + K +E +K +QKR ++ R+L +AE KNR +Q K
Sbjct: 1209 ERIEALNKEADLLIQRRKEAERKAEEKRKQIERQKRIDEEVERRLQKIAEEKNREEQLK 1267
>SB_24053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2557
Score = 27.9 bits (59), Expect = 5.5
Identities = 21/96 (21%), Positives = 39/96 (40%)
Frame = +3
Query: 189 HVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKDS 368
H+ E + E+ +R+ IK G + I A+ + ++ K+ +KD
Sbjct: 2199 HLEEEEEQKIAELEEEMEREKQAKIKAGASESEINALMAE----LQRQQDTKRMAFQKDI 2254
Query: 369 VKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAE 476
+Q+R K +L RK +Q + + AE
Sbjct: 2255 ERQRRLAKERLEARRRKRDEQQYEEDMAVSIVTMAE 2290
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 8/37 (21%)
Frame = -2
Query: 436 FCLILFFLSAN--------VSLRLFQRFCLTESFFNS 350
FCL +FF+S + S+RLF+ FC+T S F S
Sbjct: 242 FCLSIFFISKDKKEEVLHFFSIRLFKVFCVTLSGFTS 278
>SB_51415| Best HMM Match : zf-CCCH (HMM E-Value=1.1)
Length = 332
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 345 KKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAQAE 476
K + K+D+VK+++ + RKL K R +Q+K I++ +A E
Sbjct: 106 KPDCKQDAVKEQKPSGRKLKRKLYKQRKRQEKFKKIEKKKAIRE 149
>SB_50343| Best HMM Match : MAP (HMM E-Value=3.4)
Length = 243
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 336 SHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKR 458
S K+++KK S+K++ KR + K R KK S KR
Sbjct: 202 STNKRDIKKTSIKKRSMKKRSIKKRSMKKR-SIKKRSIKKR 241
>SB_20018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 27.5 bits (58), Expect = 7.3
Identities = 25/111 (22%), Positives = 47/111 (42%)
Frame = +3
Query: 135 AESKKFNAEVHRAHIFGLHVAEYMRSLEQDDEDSFKRQFSKYIKLGVTADAIEAIYKKAH 314
++S+ + E ++ G+ A LE DED + +K K VT + +
Sbjct: 2 SDSEYSSDEEDEDYVPGVESASDDEGLEDIDEDGEVKVKTKEKKKTVTKKKRKGGIQLED 61
Query: 315 EAIRADPSHKKKELKKDSVKQKRWNKRKLTLAERKNRIKQKKASFIKRLQA 467
E D + +L + ++ K++ AE+K ++ ASF K +A
Sbjct: 62 EVDDDDNDDDEVDLDATTAEELAKKKKEKEEAEKKTHVEDLWASFKKETEA 112
>SB_14664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/35 (34%), Positives = 25/35 (71%), Gaps = 3/35 (8%)
Frame = +3
Query: 345 KKELKKD---SVKQKRWNKRKLTLAERKNRIKQKK 440
KK++KK+ +K+K+ +K+K+ ++K + K+KK
Sbjct: 10 KKQIKKEEIIKIKKKKKSKKKIKKKKKKKKKKKKK 44
>SB_9039| Best HMM Match : M (HMM E-Value=0.00046)
Length = 716
Score = 27.5 bits (58), Expect = 7.3
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Frame = +3
Query: 240 KRQFSKYIKLGVTADAIEAIYKKAHEAIRADPSHKKKELKKD--SVKQKRWNKRKLTLAE 413
K +F KL ++ +++ + D + K+K L+ D SV+ + N+R+ +
Sbjct: 455 KEKFKLEEKLERERRRLQEEHEEVMAELAQDCADKRKMLQDDIASVESRLSNERQQVEQQ 514
Query: 414 RKNRIKQKKASFIKRLQAQAE 476
R+ K+++A +KR+QA+ E
Sbjct: 515 RQQLEKEQEA--LKRVQAELE 533
>SB_35735| Best HMM Match : FF (HMM E-Value=2.29995e-41)
Length = 251
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/65 (23%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 285 AIEAIYKKAHEAIRADPSHKKKELKKDSVKQK-RWNKRKLTLAERKNRIKQKKASFIKRL 461
A+E++ K ++ +KKE D KQK + + + ++ +R++ +++++A F K
Sbjct: 35 AVESVSTKEDYFMQFMEELEKKE-NSDKEKQKAKMERMEASMRKRESEVREQQAEFAKAR 93
Query: 462 QAQAE 476
+ + E
Sbjct: 94 EKEKE 98
>SB_35419| Best HMM Match : SMC_C (HMM E-Value=1.9e-05)
Length = 867
Score = 27.1 bits (57), Expect = 9.6
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 315 EAIRADPSHKKKELKKDSVKQKRWNKRKLTLAE 413
EAI+ H+K+ELKK K+K K++ T+ E
Sbjct: 549 EAIKE--KHQKQELKKQRFKEKMEKKQEETMVE 579
>SB_7120| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +3
Query: 303 KKAHEAIRADPSHKKKELKKDSVKQK 380
KKA EA D +KKE KK K+K
Sbjct: 521 KKAKEATEEDDGEEKKEKKKKKKKKK 546
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,708,269
Number of Sequences: 59808
Number of extensions: 278307
Number of successful extensions: 1304
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1242
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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