Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0458
(677 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocas... 247 2e-67
L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier prot... 246 5e-67
L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier prot... 246 5e-67
AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin b... 23 1.6
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 25 2.2
CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein. 23 6.7
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 23 6.7
AJ459959-1|CAD31058.1| 462|Anopheles gambiae dopachrome convers... 23 8.9
>AY227001-1|AAO32818.2| 301|Anopheles gambiae ADP/ATP translocase
protein.
Length = 301
Score = 247 bits (605), Expect = 2e-67
Identities = 119/150 (79%), Positives = 125/150 (83%)
Frame = +1
Query: 139 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 318
M+ ADP FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ SKQIA D++YKGIVD F
Sbjct: 1 MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60
Query: 319 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 498
VRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWRYF
Sbjct: 61 VRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWRYFLGNLG 120
Query: 499 XXXXXXXTSLCFVYPLDFARTRLAADVGKG 588
TSLCFVYPLDFARTRL ADVG+G
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLGADVGRG 150
Score = 50.8 bits (116), Expect = 4e-08
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2
Query: 584 RGDGQREFSGLGNCISKIFKSDGLIGLYRGF 676
RG G+REF+GL +C+ K KSDG+IGLYRGF
Sbjct: 149 RGAGEREFNGLLDCLKKTVKSDGIIGLYRGF 179
Score = 36.7 bits (81), Expect = 7e-04
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +1
Query: 226 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 405
P + V+ + +Q S + ++ YK +D +V+I K++G +F++G F+NV+R AL
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288
Query: 406 NFAFKDKYK 432
F D+ K
Sbjct: 289 VLVFYDEVK 297
>L11618-1|AAB04104.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 246 bits (602), Expect = 5e-67
Identities = 119/150 (79%), Positives = 124/150 (82%)
Frame = +1
Query: 139 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 318
M+ ADP FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ SKQIA D++YKGIVD F
Sbjct: 1 MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60
Query: 319 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 498
VRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWRYF
Sbjct: 61 VRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWRYFLGNLG 120
Query: 499 XXXXXXXTSLCFVYPLDFARTRLAADVGKG 588
TSLCFVYPLDFARTRL ADVG G
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLGADVGPG 150
Score = 48.8 bits (111), Expect = 2e-07
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 587 GDGQREFSGLGNCISKIFKSDGLIGLYRGF 676
G G+REF+GL +C+ K KSDG+IGLYRGF
Sbjct: 150 GAGEREFNGLLDCLKKTVKSDGIIGLYRGF 179
Score = 35.5 bits (78), Expect = 0.002
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +1
Query: 226 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 405
P + V+ + +Q S ++ YK +D +V+I K++G +F++G F+NV+R AL
Sbjct: 232 PFDTVRRRMMMQ--SWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288
Query: 406 NFAFKDKYK 432
F D+ K
Sbjct: 289 VLVFYDEVK 297
>L11617-1|AAB04105.1| 301|Anopheles gambiae ADP/ATP carrier protein
protein.
Length = 301
Score = 246 bits (602), Expect = 5e-67
Identities = 119/150 (79%), Positives = 124/150 (82%)
Frame = +1
Query: 139 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 318
M+ ADP FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ SKQIA D++YKGIVD F
Sbjct: 1 MTKKADPYGFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQAASKQIAVDKQYKGIVDCF 60
Query: 319 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQFWRYFXXXXX 498
VRIPKEQG+ +FWRGN ANVIRYFPTQALNFAFKD YKQVFLGGVDK TQFWRYF
Sbjct: 61 VRIPKEQGIGAFWRGNLANVIRYFPTQALNFAFKDVYKQVFLGGVDKNTQFWRYFLGNLG 120
Query: 499 XXXXXXXTSLCFVYPLDFARTRLAADVGKG 588
TSLCFVYPLDFARTRL ADVG G
Sbjct: 121 SGGAAGATSLCFVYPLDFARTRLGADVGPG 150
Score = 48.8 bits (111), Expect = 2e-07
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = +2
Query: 587 GDGQREFSGLGNCISKIFKSDGLIGLYRGF 676
G G+REF+GL +C+ K KSDG+IGLYRGF
Sbjct: 150 GAGEREFNGLLDCLKKTVKSDGIIGLYRGF 179
Score = 35.5 bits (78), Expect = 0.002
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = +1
Query: 226 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 405
P + V+ + +Q S ++ YK +D +V+I K++G +F++G F+NV+R AL
Sbjct: 232 PFDTVRRRMMMQ--SWPCKSEVMYKNTLDCWVKIGKQEGSGAFFKGAFSNVLR-GTGGAL 288
Query: 406 NFAFKDKYK 432
F D+ K
Sbjct: 289 VLVFYDEVK 297
>AJ439060-17|CAD27768.1| 568|Anopheles gambiae putative chitin
binding protein protein.
Length = 568
Score = 22.6 bits (46), Expect(2) = 1.6
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2
Query: 313 RRRYPCNAGRR 281
RRRYP NAG +
Sbjct: 346 RRRYPTNAGHK 356
Score = 21.0 bits (42), Expect(2) = 1.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = -2
Query: 370 RSYHARMKGDPAPWGCGRRRRRYP 299
R R++ P P R RRR P
Sbjct: 315 REAAGRLRTGPVPGAAERHRRRRP 338
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 25.0 bits (52), Expect = 2.2
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 556 VRSQGGTRSTERWLRRHHRRPDYQRSNARTASSCQR 449
V ++ + +RWLR HH + ++ SS Q+
Sbjct: 690 VVAEEAVSAVDRWLREHHLELAHAKTEMTVISSLQQ 725
>CR954256-3|CAJ14144.1| 659|Anopheles gambiae cyclin protein.
Length = 659
Score = 23.4 bits (48), Expect = 6.7
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Frame = -2
Query: 538 TRSTERWLRRHHRRPDYQRSNARTASSCQRRRGTPACTCP*RRS*APGSGST**RW--RS 365
+RS R L R R + S +R+ +S R R + R+ P G R R+
Sbjct: 417 SRSRSRSLSRSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRTPLPARGHVRARLTRRT 476
Query: 364 YHARMKGDPAPWGCGRRRRRYPCNAGRRR 278
A GRRRRR A RRR
Sbjct: 477 IPPTRVAAAAAAPEGRRRRRAIARARRRR 505
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.4 bits (48), Expect = 6.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 533 SCTPLTSHVPVLPP 574
SC L H+P LPP
Sbjct: 376 SCNSLGDHIPPLPP 389
>AJ459959-1|CAD31058.1| 462|Anopheles gambiae dopachrome conversion
enzyme protein.
Length = 462
Score = 23.0 bits (47), Expect = 8.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 397 QALNFAFKDKYKQVFLGGVDKKTQF 471
Q +NFA+ D + LG D T+F
Sbjct: 237 QGINFAWDDGIFSIALGNPDPVTKF 261
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 662,013
Number of Sequences: 2352
Number of extensions: 13225
Number of successful extensions: 53
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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