Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0452
         (702 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    24   1.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   2.4  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   2.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.2  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    22   4.2  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   5.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   5.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.7  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   9.7  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 483 YTHPHRYRHKMSHKSLSR 536
           + HPHR+R K +  S+ R
Sbjct: 99  FVHPHRFRLKFNISSIPR 116


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 697 SIHLLIWIFSVFLL 656
           S+HLL+WI   F+L
Sbjct: 252 SLHLLLWITVTFIL 265


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 66  EFSHLSTNKIMNITRKEVLRLYRNLLMYSKSL 161
           ++  L   K M    KEVLRLY ++   ++SL
Sbjct: 37  DYKSLQELKYMERCIKEVLRLYPSVPFIARSL 68


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 153 KSLKLTDPDYFRRSIKIEFKNNQNLTD 233
           K L++ DPDY+     I F +   ++D
Sbjct: 599 KYLRVVDPDYYEFETHIFFDDAFEISD 625


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 153 KSLKLTDPDYFRRSIKIEFKNNQNLTD 233
           K L++ DPDY+     I F +   ++D
Sbjct: 599 KYLRVVDPDYYEFETHIFFDDAFEISD 625


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 153 KSLKLTDPDYFRRSIKIEFKNNQNLTD 233
           K L++ DPDY+     I F +   ++D
Sbjct: 599 KYLRVVDPDYYEFETHIFFDDAFEISD 625


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 153 KSLKLTDPDYFRRSIKIEFKNNQNLTD 233
           K L++ DPDY+     I F +   ++D
Sbjct: 599 KYLRVVDPDYYEFETHIFFDDAFEISD 625


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 69  FSHLSTNKIMNITRKEVLRLYRNLLMYSKSL 161
           ++ L   K M    KEVLRLY ++   S+ L
Sbjct: 39  YNDLQELKYMERVIKEVLRLYPSVHYISREL 69


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 579 QFFN*QFPGFLPIIVLTTTC 520
           QF   QFPG   ++V   TC
Sbjct: 177 QFLYNQFPGSSQVVVKDETC 196


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 579 QFFN*QFPGFLPIIVLTTTC 520
           QF   QFPG   ++V   TC
Sbjct: 197 QFLYNQFPGSSQVVVKDETC 216


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 4/16 (25%), Positives = 13/16 (81%)
 Frame = -2

Query: 131  IQP*YFFPGNIHNFIS 84
            + P Y++PG+++++ +
Sbjct: 2526 VAPLYYYPGDVYDYFN 2541


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 69  FSHLSTNKIMNITRKEVLRLYRNLLMYSKSL 161
           +  L   K +    KEVLRLY ++   S+ L
Sbjct: 355 YQDLQEMKYLERCVKEVLRLYPSVHFISRKL 385


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +3

Query: 69  FSHLSTNKIMNITRKEVLRLYRNLLMYSKSL 161
           +  L   K +    KEVLRLY ++   S+ L
Sbjct: 355 YQDLQEMKYLERCVKEVLRLYPSVHFISRKL 385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,352
Number of Sequences: 336
Number of extensions: 3642
Number of successful extensions: 19
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18530690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)