Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0452
         (702 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC062329-1|AAH62329.1|  166|Homo sapiens chromosome 12 open read...   106   9e-23
BC018145-1|AAH18145.1|  166|Homo sapiens chromosome 12 open read...   106   9e-23
AK095982-1|BAC04665.1|  166|Homo sapiens protein ( Homo sapiens ...   106   9e-23
AF061733-1|AAG43144.1|  166|Homo sapiens My030 protein protein.       106   9e-23
BC020885-1|AAH20885.1|  119|Homo sapiens C12orf65 protein protein.     66   2e-10
BC042196-1|AAH42196.1|  445|Homo sapiens mitochondrial translati...    48   4e-05
AL354696-5|CAI16615.1|  445|Homo sapiens mitochondrial translati...    48   4e-05
AF072934-1|AAD12759.1|  445|Homo sapiens translational release f...    48   4e-05
BC011873-1|AAH11873.1|  380|Homo sapiens mitochondrial translati...    45   3e-04
AL080276-8|CAB65994.1|  380|Homo sapiens mitochondrial translati...    45   3e-04
AL080276-5|CAI18897.1|  231|Homo sapiens mitochondrial translati...    45   3e-04
AL080276-4|CAI18896.1|  164|Homo sapiens mitochondrial translati...    45   3e-04
AK027684-1|BAB55295.1|  238|Homo sapiens protein ( Homo sapiens ...    45   3e-04
BC100276-1|AAI00277.1|   88|Homo sapiens LYR motif containing 5 ...    38   0.035
BC071769-1|AAH71769.1|   88|Homo sapiens LYR motif containing 5 ...    38   0.035
BC107577-1|AAI07578.1|  354|Homo sapiens DNAJA5 protein protein.       31   5.3  
BC050472-1|AAH50472.1|  373|Homo sapiens DNAJA5 protein protein.       31   5.3  
AY258422-1|AAP81807.1|  531|Homo sapiens DnaJ domain protein pro...    31   5.3  
AY177688-1|AAO46910.1|  531|Homo sapiens GS3 protein protein.          31   5.3  
AK127749-1|BAC87112.1|  460|Homo sapiens Accn1).  protein.             31   5.3  
BC036768-1|AAH36768.1|  669|Homo sapiens GUF1 GTPase homolog (S....    30   9.2  
AK131107-1|BAC85157.1|  597|Homo sapiens FLJ00408 protein protein.     30   9.2  
AK025248-1|BAB15090.1|  297|Homo sapiens protein ( Homo sapiens ...    30   9.2  
AB007936-1|BAA32312.2| 2687|Homo sapiens KIAA0467 protein protein.     30   9.2  

>BC062329-1|AAH62329.1|  166|Homo sapiens chromosome 12 open reading
           frame 65 protein.
          Length = 166

 Score =  106 bits (254), Expect = 9e-23
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
 Frame = +1

Query: 373 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKK 552
           DY  +  ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+KCH +R  D NRK 
Sbjct: 48  DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107

Query: 553 ARELLIEKLDDMINGPES-VSAHRKLIEEKKYKRNATKKQKISK---LKDEWK 699
           AR++L EK+D   NG  S V   ++   +KK +R    K+ + K   LK+ W+
Sbjct: 108 ARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWE 160


>BC018145-1|AAH18145.1|  166|Homo sapiens chromosome 12 open reading
           frame 65 protein.
          Length = 166

 Score =  106 bits (254), Expect = 9e-23
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
 Frame = +1

Query: 373 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKK 552
           DY  +  ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+KCH +R  D NRK 
Sbjct: 48  DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107

Query: 553 ARELLIEKLDDMINGPES-VSAHRKLIEEKKYKRNATKKQKISK---LKDEWK 699
           AR++L EK+D   NG  S V   ++   +KK +R    K+ + K   LK+ W+
Sbjct: 108 ARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWE 160


>AK095982-1|BAC04665.1|  166|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38663 fis, clone HLUNG2001712, weakly similar to
           PEPTIDE CHAIN RELEASE FACTOR 2. ).
          Length = 166

 Score =  106 bits (254), Expect = 9e-23
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
 Frame = +1

Query: 373 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKK 552
           DY  +  ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+KCH +R  D NRK 
Sbjct: 48  DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107

Query: 553 ARELLIEKLDDMINGPES-VSAHRKLIEEKKYKRNATKKQKISK---LKDEWK 699
           AR++L EK+D   NG  S V   ++   +KK +R    K+ + K   LK+ W+
Sbjct: 108 ARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWE 160


>AF061733-1|AAG43144.1|  166|Homo sapiens My030 protein protein.
          Length = 166

 Score =  106 bits (254), Expect = 9e-23
 Identities = 53/113 (46%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
 Frame = +1

Query: 373 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKK 552
           DY  +  ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+KCH +R  D NRK 
Sbjct: 48  DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107

Query: 553 ARELLIEKLDDMINGPES-VSAHRKLIEEKKYKRNATKKQKISK---LKDEWK 699
           AR++L EK+D   NG  S V   ++   +KK +R    K+ + K   LK+ W+
Sbjct: 108 ARKILQEKVDVFYNGENSPVHKEKREAAKKKQERKKRAKETLEKKKLLKELWE 160


>BC020885-1|AAH20885.1|  119|Homo sapiens C12orf65 protein protein.
          Length = 119

 Score = 65.7 bits (153), Expect = 2e-10
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = +1

Query: 373 DYSKVPKINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIK 513
           DY  +  ++E EL E+FV+G GPGG A NK SNCVVL HIP+G V+K
Sbjct: 48  DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVK 94


>BC042196-1|AAH42196.1|  445|Homo sapiens mitochondrial
           translational release factor 1 protein.
          Length = 445

 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = +1

Query: 391 KINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLI 570
           K++  +L     R  G GG  VNK  + V L HIPTG V++C   R Q  N++ A  +L 
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353

Query: 571 EKLDDMI 591
            +L   I
Sbjct: 354 ARLYQQI 360


>AL354696-5|CAI16615.1|  445|Homo sapiens mitochondrial
           translational release factor 1 protein.
          Length = 445

 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = +1

Query: 391 KINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLI 570
           K++  +L     R  G GG  VNK  + V L HIPTG V++C   R Q  N++ A  +L 
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353

Query: 571 EKLDDMI 591
            +L   I
Sbjct: 354 ARLYQQI 360


>AF072934-1|AAD12759.1|  445|Homo sapiens translational release
           factor 1 protein.
          Length = 445

 Score = 47.6 bits (108), Expect = 4e-05
 Identities = 25/67 (37%), Positives = 35/67 (52%)
 Frame = +1

Query: 391 KINECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLI 570
           K++  +L     R  G GG  VNK  + V L HIPTG V++C   R Q  N++ A  +L 
Sbjct: 294 KLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353

Query: 571 EKLDDMI 591
            +L   I
Sbjct: 354 ARLYQQI 360


>BC011873-1|AAH11873.1|  380|Homo sapiens mitochondrial
           translational release factor 1-like protein.
          Length = 380

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 25/65 (38%), Positives = 32/65 (49%)
 Frame = +1

Query: 394 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 573
           IN  +L     R SG GG  VN   + V + H+PTG V +C   R Q  N++ A   L  
Sbjct: 234 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 293

Query: 574 KLDDM 588
           KL  M
Sbjct: 294 KLYSM 298


>AL080276-8|CAB65994.1|  380|Homo sapiens mitochondrial
           translational release factor 1-like protein.
          Length = 380

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 25/65 (38%), Positives = 32/65 (49%)
 Frame = +1

Query: 394 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 573
           IN  +L     R SG GG  VN   + V + H+PTG V +C   R Q  N++ A   L  
Sbjct: 234 INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 293

Query: 574 KLDDM 588
           KL  M
Sbjct: 294 KLYSM 298


>AL080276-5|CAI18897.1|  231|Homo sapiens mitochondrial
           translational release factor 1-like protein.
          Length = 231

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 25/65 (38%), Positives = 32/65 (49%)
 Frame = +1

Query: 394 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 573
           IN  +L     R SG GG  VN   + V + H+PTG V +C   R Q  N++ A   L  
Sbjct: 85  INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 144

Query: 574 KLDDM 588
           KL  M
Sbjct: 145 KLYSM 149


>AL080276-4|CAI18896.1|  164|Homo sapiens mitochondrial
           translational release factor 1-like protein.
          Length = 164

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 25/65 (38%), Positives = 32/65 (49%)
 Frame = +1

Query: 394 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 573
           IN  +L     R SG GG  VN   + V + H+PTG V +C   R Q  N++ A   L  
Sbjct: 98  INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 157

Query: 574 KLDDM 588
           KL  M
Sbjct: 158 KLYSM 162


>AK027684-1|BAB55295.1|  238|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14778 fis, clone NT2RP4000370, moderately
           similar to MITOCHONDRIAL PEPTIDE CHAIN RELEASE FACTOR 1
           PRECURSOR. ).
          Length = 238

 Score = 44.8 bits (101), Expect = 3e-04
 Identities = 25/65 (38%), Positives = 32/65 (49%)
 Frame = +1

Query: 394 INECELSEKFVRGSGPGGSAVNKNSNCVVLTHIPTGTVIKCHTSRCQDDNRKKARELLIE 573
           IN  +L     R SG GG  VN   + V + H+PTG V +C   R Q  N++ A   L  
Sbjct: 92  INPKDLRIDTKRASGAGGQHVNTTDSAVRIVHLPTGVVSECQQERSQLKNKELAMTKLRA 151

Query: 574 KLDDM 588
           KL  M
Sbjct: 152 KLYSM 156


>BC100276-1|AAI00277.1|   88|Homo sapiens LYR motif containing 5
           protein.
          Length = 88

 Score = 37.9 bits (84), Expect = 0.035
 Identities = 20/61 (32%), Positives = 35/61 (57%)
 Frame = +3

Query: 99  NITRKEVLRLYRNLLMYSKSLKLTDPDYFRRSIKIEFKNNQNLTDLEKISFAYQKGQALL 278
           N  R EVL+LY+NLL   +       DYF++ +K  F  N+++ + EKI     +G+ ++
Sbjct: 3   NSLRGEVLKLYKNLLYLGRDYP-KGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEFVM 61

Query: 279 Q 281
           +
Sbjct: 62  K 62


>BC071769-1|AAH71769.1|   88|Homo sapiens LYR motif containing 5
           protein.
          Length = 88

 Score = 37.9 bits (84), Expect = 0.035
 Identities = 20/61 (32%), Positives = 35/61 (57%)
 Frame = +3

Query: 99  NITRKEVLRLYRNLLMYSKSLKLTDPDYFRRSIKIEFKNNQNLTDLEKISFAYQKGQALL 278
           N  R EVL+LY+NLL   +       DYF++ +K  F  N+++ + EKI     +G+ ++
Sbjct: 3   NSLRGEVLKLYKNLLYLGRDYP-KGADYFKKRLKNIFLKNKDVKNPEKIKELIAQGEFVM 61

Query: 279 Q 281
           +
Sbjct: 62  K 62


>BC107577-1|AAI07578.1|  354|Homo sapiens DNAJA5 protein protein.
          Length = 354

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = +1

Query: 526 RCQDDNRKKARELLIEKLDDMINGPESVSAHRKLIEEKKYKRNATKKQKISKLKDEWK 699
           + +D  RK+  EL+ + +  +    + V AHRKL+EE    +NA K +K  +++ + K
Sbjct: 65  KIRDKARKEKNELVRQLVAFIRKRDKRVQAHRKLVEE----QNAEKARKAEEMRRQQK 118


>BC050472-1|AAH50472.1|  373|Homo sapiens DNAJA5 protein protein.
          Length = 373

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = +1

Query: 526 RCQDDNRKKARELLIEKLDDMINGPESVSAHRKLIEEKKYKRNATKKQKISKLKDEWK 699
           + +D  RK+  EL+ + +  +    + V AHRKL+EE    +NA K +K  +++ + K
Sbjct: 32  KIRDKARKEKNELVRQLVAFIRKRDKRVQAHRKLVEE----QNAEKARKAEEMRRQQK 85


>AY258422-1|AAP81807.1|  531|Homo sapiens DnaJ domain protein
           protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = +1

Query: 526 RCQDDNRKKARELLIEKLDDMINGPESVSAHRKLIEEKKYKRNATKKQKISKLKDEWK 699
           + +D  RK+  EL+ + +  +    + V AHRKL+EE    +NA K +K  +++ + K
Sbjct: 190 KIRDKARKEKNELVRQLVAFIRKRDKRVQAHRKLVEE----QNAEKARKAEEMRRQQK 243


>AY177688-1|AAO46910.1|  531|Homo sapiens GS3 protein protein.
          Length = 531

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = +1

Query: 526 RCQDDNRKKARELLIEKLDDMINGPESVSAHRKLIEEKKYKRNATKKQKISKLKDEWK 699
           + +D  RK+  EL+ + +  +    + V AHRKL+EE    +NA K +K  +++ + K
Sbjct: 190 KIRDKARKEKNELVRQLVAFIRKRDKRVQAHRKLVEE----QNAEKARKAEEMRRQQK 243


>AK127749-1|BAC87112.1|  460|Homo sapiens Accn1).  protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 5.3
 Identities = 18/58 (31%), Positives = 33/58 (56%)
 Frame = +1

Query: 526 RCQDDNRKKARELLIEKLDDMINGPESVSAHRKLIEEKKYKRNATKKQKISKLKDEWK 699
           + +D  RK+  EL+ + +  +    + V AHRKL+EE    +NA K +K  +++ + K
Sbjct: 74  KIRDKARKEKNELVRQLVAFIRKRDKRVQAHRKLVEE----QNAEKARKAEEMRRQQK 127


>BC036768-1|AAH36768.1|  669|Homo sapiens GUF1 GTPase homolog (S.
           cerevisiae) protein.
          Length = 669

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 511 KCHTSRCQDDNRKKARELLIEK-LDDMINGPESVSAHRKLIEEKKYKRNATKKQKISKLK 687
           K    R +D   ++  E+ I+  +   I   E+V A+RK +  K Y  + T+K K+ K +
Sbjct: 580 KAICERLKDSLPRQLFEIAIQAAIGSKIIARETVKAYRKNVLAKCYGGDITRKMKLLKRQ 639

Query: 688 DEWKK 702
            E KK
Sbjct: 640 AEGKK 644


>AK131107-1|BAC85157.1|  597|Homo sapiens FLJ00408 protein protein.
          Length = 597

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 464 FLFTADPPGPLPLTNFSDNSHSL 396
           FL T +PPGPLPL +    S SL
Sbjct: 341 FLLTLEPPGPLPLVSGRSASSSL 363


>AK025248-1|BAB15090.1|  297|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21595 fis, clone COL07069. ).
          Length = 297

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
 Frame = +1

Query: 511 KCHTSRCQDDNRKKARELLIEK-LDDMINGPESVSAHRKLIEEKKYKRNATKKQKISKLK 687
           K    R +D   ++  E+ I+  +   I   E+V A+RK +  K Y  + T+K K+ K +
Sbjct: 225 KAICERLKDSLPRQLFEIAIQAAIGSKIIARETVKAYRKNVLAKCYGGDITRKMKLLKRQ 284

Query: 688 DEWKK 702
            E KK
Sbjct: 285 AEGKK 289


>AB007936-1|BAA32312.2| 2687|Homo sapiens KIAA0467 protein protein.
          Length = 2687

 Score = 29.9 bits (64), Expect = 9.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -2

Query: 464 FLFTADPPGPLPLTNFSDNSHSL 396
           FL T +PPGPLPL +    S SL
Sbjct: 76  FLLTLEPPGPLPLVSGRSASSSL 98


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,011,957
Number of Sequences: 237096
Number of extensions: 1878494
Number of successful extensions: 7633
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 7458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7628
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8119219030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)