Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brS-0451
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0458 + 25370542-25370597,25371591-25371679,25372687-253727... 95 5e-20
02_05_0126 + 26050093-26050247,26051654-26051727,26051819-260519... 89 3e-18
02_04_0627 + 24585712-24585845,24586415-24586503,24587039-245871... 85 4e-17
08_02_1625 + 28336168-28336409,28336491-28336564,28337162-283372... 57 1e-08
01_07_0100 + 41082662-41083039 52 5e-07
01_04_0016 + 15106791-15107102 52 5e-07
06_01_0847 - 6451525-6451678,6452870-6453066,6454300-6454591,645... 51 1e-06
12_02_0650 + 21514015-21514329 48 6e-06
11_06_0601 + 25407591-25407920 48 1e-05
07_01_0364 + 2710650-2711228 48 1e-05
11_06_0603 + 25416922-25417251 47 1e-05
11_06_0605 + 25425964-25426293 47 2e-05
12_02_0649 + 21502917-21503228 46 3e-05
11_06_0600 + 25401849-25402175 46 3e-05
12_01_0485 - 3848721-3849227,3852019-3852369 44 1e-04
04_03_0764 + 19367257-19367664 44 1e-04
02_03_0393 + 18514250-18514657 44 2e-04
10_08_0532 + 18580579-18580746,18581923-18581997,18582659-185838... 42 7e-04
01_01_0666 + 5084920-5085297 42 7e-04
05_02_0046 + 6004240-6004656 41 0.001
10_06_0021 - 9701729-9701805,9701905-9701959,9702671-9702934 38 0.006
01_06_1217 + 35485182-35485949 38 0.006
06_01_0863 + 6545563-6546714 38 0.008
04_03_0865 + 20402711-20404057 38 0.008
07_01_0425 + 3235338-3236108 38 0.011
07_03_1565 - 27760407-27760463,27760905-27761513 37 0.015
05_05_0177 - 22993844-22994617 37 0.019
04_04_1325 + 32666302-32667633 37 0.019
02_01_0017 - 112766-113650 37 0.019
01_05_0190 + 19085897-19085968,19086269-19086344,19086945-190869... 36 0.034
05_03_0650 - 16582296-16583042 34 0.10
02_05_0750 - 31479876-31480985 33 0.18
10_08_0410 - 17716370-17716743,17716839-17716939,17717104-177173... 33 0.32
03_05_0501 - 24944533-24945507 32 0.42
03_02_1040 + 13601779-13602390 32 0.42
05_07_0123 + 27847555-27847953 31 0.73
01_01_0523 + 3837452-3837512,3837923-3838060,3838196-3838236,383... 31 0.73
05_01_0410 - 3234455-3234466,3234851-3234950,3235037-3235161,323... 30 1.7
01_01_0989 + 7816812-7817195 29 2.9
12_02_0670 - 21700523-21700932,21701266-21701390,21701476-217016... 29 3.9
10_08_0426 - 17817975-17818582,17819068-17819209,17819648-178197... 29 3.9
02_05_0727 + 31264798-31265297,31265962-31266417,31266503-31266938 29 5.2
01_06_0189 - 27319698-27320141 29 5.2
01_01_0997 + 7884974-7885043,7885689-7885975,7886056-7886311,788... 28 6.8
01_01_0957 + 7516314-7517489 28 6.8
>04_04_0458 +
25370542-25370597,25371591-25371679,25372687-25372785,
25372960-25373054
Length = 112
Score = 95.1 bits (226), Expect = 5e-20
Identities = 45/90 (50%), Positives = 58/90 (64%)
Frame = +2
Query: 119 KEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRT 298
KE ++ VVV+SKSYCP+C K +FE++ K IEL+ DG+ +Q LA+ TG RT
Sbjct: 7 KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66
Query: 299 VPQVFINGNCVGGGSDVKALYESGKLEPML 388
VP VFING +GG D AL GKL P+L
Sbjct: 67 VPNVFINGKHIGGCDDTLALNNEGKLVPLL 96
>02_05_0126 +
26050093-26050247,26051654-26051727,26051819-26051917,
26052003-26052070
Length = 131
Score = 89.4 bits (212), Expect = 3e-18
Identities = 39/92 (42%), Positives = 59/92 (64%)
Frame = +2
Query: 113 FIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGF 292
F++ AI +++ +FSK+YCPY AK +F +K+ ++EL+ R+DG IQ L L G
Sbjct: 33 FVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLREDGREIQSVLLDLVGR 92
Query: 293 RTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
TVPQVF+NG VGG D + +G+L+ +L
Sbjct: 93 HTVPQVFVNGQHVGGSDDTANAHSNGQLQKLL 124
>02_04_0627 +
24585712-24585845,24586415-24586503,24587039-24587137,
24587326-24587405
Length = 133
Score = 85.4 bits (202), Expect = 4e-17
Identities = 39/90 (43%), Positives = 55/90 (61%)
Frame = +2
Query: 119 KEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRT 298
KE ++ VVVFSK+YCP+C K + ++ K +EL+ DG+ +Q LA TG RT
Sbjct: 33 KEIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALADWTGQRT 92
Query: 299 VPQVFINGNCVGGGSDVKALYESGKLEPML 388
VP VFI G +GG D A+++ G L P+L
Sbjct: 93 VPCVFIKGKHIGGCDDTMAMHKGGNLVPLL 122
>08_02_1625 +
28336168-28336409,28336491-28336564,28337162-28337236,
28337433-28337459,28339261-28339634,28339746-28340492
Length = 512
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 104 IQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERD-DGNTIQDNLAQ 280
++ +K ++ + VV++SKS+C Y K +F+++ VIEL++ G +Q L +
Sbjct: 59 MEDSVKRTLADNPVVIYSKSWCSYSMEVKALFKRIGVQPHVIELDQLGAQGPQLQKVLER 118
Query: 281 LTGFRTVPQVFINGNCVGG 337
LTG TVP VFI G +GG
Sbjct: 119 LTGQSTVPNVFIGGKHIGG 137
>01_07_0100 + 41082662-41083039
Length = 125
Score = 52.0 bits (119), Expect = 5e-07
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +2
Query: 131 SKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRT--VP 304
S+ VV+F S C C + K +F ++ V E+++ +G ++ LA + G RT VP
Sbjct: 10 SQRAVVIFGASNCFMCHVVKTLFSELGVSWAVHEVDKDPNGKDVERALAGMVG-RTPPVP 68
Query: 305 QVFINGNCVGGGSDVKALYESGKLEPML 388
VFI G VG V +L+ +GKL P+L
Sbjct: 69 AVFIGGKLVGPTDQVMSLHLAGKLVPLL 96
>01_04_0016 + 15106791-15107102
Length = 103
Score = 52.0 bits (119), Expect = 5e-07
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 143 VVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTG-FRTVPQVFIN 319
VV+FS S C C +F ++ V+EL+E G ++ LA+L G VP VFI
Sbjct: 13 VVIFSMSSCCMCHTVTRLFCELGVNPTVVELDEDPRGKEMEKALARLLGRSPAVPAVFIG 72
Query: 320 GNCVGGGSDVKALYESGKLEPML 388
G VG V +L+ SG L P+L
Sbjct: 73 GRLVGSTDKVMSLHLSGNLVPLL 95
>06_01_0847 -
6451525-6451678,6452870-6453066,6454300-6454591,
6454622-6454654,6454869-6455102,6455204-6455259,
6455552-6456754
Length = 722
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/97 (29%), Positives = 55/97 (56%)
Frame = +2
Query: 89 AGSVDIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQD 268
AG ++ I++ K ++++++K C CK+ + F + K +K +E+N D + +
Sbjct: 227 AGHENVPDLIEQPTGKGRIIIYTKLGCEDCKMVRS-FMRQKM-LKYVEINI-DIFPSRKM 283
Query: 269 NLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLE 379
L TG TVP+V+ N +GG +++K + ESG L+
Sbjct: 284 ELENNTGSSTVPKVYFNDLLIGGLTELKKMEESGILD 320
>12_02_0650 + 21514015-21514329
Length = 104
Score = 48.4 bits (110), Expect = 6e-06
Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = +2
Query: 128 ISKDK-VVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDD--GNTIQDNLAQLTGFRT 298
+S +K VV+F+ S CP C +F + V EL +RD G ++ +LA+ G
Sbjct: 7 LSTEKAVVIFTASNCPMCHTVVSLFSDLGVGAAVHEL-DRDPLHGRDMERDLARRLGRSP 65
Query: 299 -VPQVFINGNCVGGGSDVKALYESGKLEPML 388
VP VFI G VG V +L+ +GKL PML
Sbjct: 66 PVPAVFIAGKLVGSTDRVMSLHLAGKLVPML 96
>11_06_0601 + 25407591-25407920
Length = 109
Score = 47.6 bits (108), Expect = 1e-05
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Frame = +2
Query: 110 QFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLT- 286
+ + S+ VVVF+KS C C + ++ V EL+ G ++ LA+
Sbjct: 3 EMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDRDPLGKEMEKELARRLY 62
Query: 287 -----GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
G VP VFI G+ VGG S V A++ G+L P+L
Sbjct: 63 GSSGRGGPAVPAVFIGGSLVGGTSKVMAMHLKGELVPLL 101
>07_01_0364 + 2710650-2711228
Length = 192
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Frame = +2
Query: 56 QSGKITRSSKMAGSVDIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIEL 235
++ + A + + + + S + VVVFS S C C + K + + V EL
Sbjct: 72 ETAAVEEEEAAAAMMSVYERVARMASGNAVVVFSASGCCMCHVVKRLLLGLGVGPAVYEL 131
Query: 236 NERDDGNTIQDNLAQLT--GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
++ IQ L+QL G VP VF+ G +GG V A + +G L P+L
Sbjct: 132 DQLAAAADIQAALSQLLPPGQPPVPVVFVGGRLLGGVEKVMACHINGTLVPLL 184
>11_06_0603 + 25416922-25417251
Length = 109
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +2
Query: 110 QFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLT- 286
+ + S+ VVVF+KS C C + ++ V EL+ G ++ LA+
Sbjct: 3 EMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDREPLGKEMERELARRLY 62
Query: 287 -----GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
G VP VFI G+ VGG S V ++ G+L PML
Sbjct: 63 GSGGRGGPAVPAVFIGGSLVGGTSKVMTVHLKGELVPML 101
>11_06_0605 + 25425964-25426293
Length = 109
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +2
Query: 110 QFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLT- 286
+ + S+ VVVF+KS C C + ++ V EL+ G ++ LA+
Sbjct: 3 EMVARLASERAVVVFTKSGCCMCTAVTTLLGELAVSAAVHELDREPLGKEMERELARRLY 62
Query: 287 -----GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
G VP VFI G+ VG S V A++ G+L PML
Sbjct: 63 GSGGRGGPAVPAVFIGGSLVGSTSKVMAMHLKGELVPML 101
>12_02_0649 + 21502917-21503228
Length = 103
Score = 46.0 bits (104), Expect = 3e-05
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Frame = +2
Query: 116 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 295
+ + S+ VV+F+ S C C +F + V EL++ G ++ L +L G
Sbjct: 4 VMKLASERAVVIFTLSSCCMCHTVTRLFCDLGVNALVHELDQDPRGKEMERALLKLLGRG 63
Query: 296 T-VPQVFINGNCVGGGSDVKALYESGKLEPML 388
VP VFI G VGG + + +L+ G+L PML
Sbjct: 64 PPVPVVFIGGKLVGGTNKIMSLHLGGELIPML 95
>11_06_0600 + 25401849-25402175
Length = 108
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Frame = +2
Query: 116 IKEAISKDKVVVFSKSYCPYCKLAKDVFE-KVKQPIKVIELNERDDGNTIQDNLAQLT-- 286
+ + S+ VVVF+ S C C + ++ V EL++ G ++ LA+
Sbjct: 4 VAKLASERAVVVFTASNCGMCHAVTSLLVGELGVNAAVHELDKDPRGRDMERELARRLNG 63
Query: 287 ---GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
G R +P VF+ GN VGG + V +L+ +G+L PML
Sbjct: 64 GGGGGRALPAVFVGGNLVGGANRVMSLHLAGELVPML 100
>12_01_0485 - 3848721-3849227,3852019-3852369
Length = 285
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Frame = +2
Query: 65 KITRSSKMAGSVDIQQFIKEAISKDKVVVFSKS-----YCPYCKLAKDVFEKVKQPIKVI 229
++T + +V ++Q I + +KVV F K C + + + E +
Sbjct: 171 RLTPGRHVQLTVPLEQLIDRLVKDNKVVAFIKGSRSAPQCGFSQRVVGILESHGVDFVTV 230
Query: 230 ELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKL 376
++ + + + +++ L + + T PQVF+ G VGG V ++ E G+L
Sbjct: 231 DVLDEEHNHGLRETLKTYSNWPTFPQVFVGGELVGGCDIVSSMAEKGEL 279
>04_03_0764 + 19367257-19367664
Length = 135
Score = 44.4 bits (100), Expect = 1e-04
Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 5/96 (5%)
Frame = +2
Query: 116 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGF- 292
++ S+ VVVFS S C C K +F + V EL+ G ++ LA+L G
Sbjct: 32 VERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPAVHELDLDPRGRDLERALARLVGAG 91
Query: 293 ----RTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
VP VFI G VG V A + +G L P+L
Sbjct: 92 GAAAAAVPVVFIGGKLVGAMDRVMAAHINGSLVPLL 127
>02_03_0393 + 18514250-18514657
Length = 135
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = +2
Query: 116 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 295
++ S+ VVVFS S C C K +F + V EL+ G ++ LA+L G+
Sbjct: 29 VERLASESAVVVFSVSSCCMCHAVKRLFCGMGVHPTVHELDLDPRGRELERALARLVGYG 88
Query: 296 --------TVPQVFINGNCVGGGSDVKALYESGKLEPML 388
VP VFI G VG V A + +G L P+L
Sbjct: 89 GPAAASPPVVPVVFIGGKLVGAMDRVMAAHINGSLVPLL 127
>10_08_0532 +
18580579-18580746,18581923-18581997,18582659-18583887,
18584853-18585013,18585272-18585279,18587737-18588768
Length = 890
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 4/119 (3%)
Frame = +2
Query: 35 EIQYMGSQSGKITRSSKMAGSVDIQQFIKEAISKDKVVVFSKSYC--PYCKLAKDVFEKV 208
++Q M Q+G SS + + +++ ++ V +F K P C ++ V + +
Sbjct: 130 KVQEMAQQNGASATSSAEDA---LNKRLEQLVNSHPVFLFMKGTPEQPRCGFSRKVVDVL 186
Query: 209 KQPIKVIELNERD--DGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLE 379
KQ + +E D N +++ + + + + T PQ++ G +GG V A++ESG+L+
Sbjct: 187 KQ--EGVEFGSFDILTDNDVREGMKKFSNWPTFPQLYCKGELLGGCDIVIAMHESGELK 243
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 167 CPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSD 346
C + + ++ K P ++ D+ ++ L L+ + + PQ++ING VGG
Sbjct: 312 CGFSGKLVHILKQEKIPFSSFDILTDDE---VRQGLKLLSNWPSYPQLYINGELVGGSDI 368
Query: 347 VKALYESGKLEPML 388
V +++SG+L+ +L
Sbjct: 369 VMEMHKSGELKKVL 382
Score = 33.1 bits (72), Expect = 0.24
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Frame = +2
Query: 65 KITRSSKMAGSVDIQQFIKEAISKDKVVVFSKSY--CPYCKLAKDVFEKVKQPIKVIELN 238
K+ + ++ +K IS V++F K P C + V +KQ
Sbjct: 380 KVLSEKGIVAKESLEDRLKALISSAPVMLFMKGTPDAPRCGFSSKVVNALKQAGVSFGAF 439
Query: 239 ERDDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
+ ++ L + + T PQ++ +GG V L +SG+L+ L
Sbjct: 440 DILSDEEVRQGLKTYSNWPTFPQLYYKSELIGGCDIVLELEKSGELKSTL 489
>01_01_0666 + 5084920-5085297
Length = 125
Score = 41.5 bits (93), Expect = 7e-04
Identities = 26/87 (29%), Positives = 43/87 (49%)
Frame = +2
Query: 128 ISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQ 307
+ + VVVF++ C + + + V VIEL +G ++ A L G +P
Sbjct: 35 VRESPVVVFARRGCYMAHVMRRLLAAVGAHATVIEL----EGGAAEEEEAALGGGAALPA 90
Query: 308 VFINGNCVGGGSDVKALYESGKLEPML 388
+F+ G+ VGG + L+ SG+L P L
Sbjct: 91 LFVGGDPVGGLEGLMGLHLSGRLVPRL 117
>05_02_0046 + 6004240-6004656
Length = 138
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/91 (28%), Positives = 42/91 (46%)
Frame = +2
Query: 116 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFR 295
I + + VV+F++ C C + + + V VIEL+E ++ A
Sbjct: 45 IGRLVRESPVVIFARRGCCMCHVMRRLLAAVGAHATVIELDE-----AAEEAAASAAAAA 99
Query: 296 TVPQVFINGNCVGGGSDVKALYESGKLEPML 388
VP +F+ G VGG + L+ SG+L P L
Sbjct: 100 AVPALFVGGAPVGGLDGLMGLHLSGRLVPRL 130
>10_06_0021 - 9701729-9701805,9701905-9701959,9702671-9702934
Length = 131
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 296 TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 394
T+PQVF+ G +GG +V+ L+ESG+L ++ G
Sbjct: 20 TLPQVFVGGRHLGGAEEVRRLHESGELRRVVAG 52
>01_06_1217 + 35485182-35485949
Length = 255
Score = 38.3 bits (85), Expect = 0.006
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +2
Query: 296 TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 394
T+PQVF+ G +GG +V+ L+ESG+L ++ G
Sbjct: 163 TLPQVFVGGRHLGGAEEVRRLHESGELRRVVAG 195
>06_01_0863 + 6545563-6546714
Length = 383
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +2
Query: 293 RTVPQVFINGNCVGGGSDVKALYESGKLEPMLI 391
R +PQVF++G VGG DV+ ++ESG+L L+
Sbjct: 276 RPLPQVFVDGCHVGGAEDVRRMHESGELTGTLL 308
>04_03_0865 + 20402711-20404057
Length = 448
Score = 37.9 bits (84), Expect = 0.008
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +2
Query: 218 IKVIELNERDDGNTIQDNLAQLTGFRTV--PQVFINGNCVGGGSDVKALYESGKLEPMLI 391
+K+IE + D ++ L L G R V P VF+ G VGG ++V L E GKL+ +L
Sbjct: 334 VKLIERDVSMDSG-YREELRLLLGGREVRVPAVFVRGRHVGGAAEVTKLEEEGKLKALLQ 392
Query: 392 G 394
G
Sbjct: 393 G 393
>07_01_0425 + 3235338-3236108
Length = 256
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 260 IQDNLAQLTGFRTVP-QVFINGNCVGGGSDVKALYESGKLEPML 388
++D L +TG + VP ++F+ G VGG + V AL+E G+L +L
Sbjct: 150 LRDELWSVTGEKAVPPRLFVRGRDVGGAAQVLALHEDGRLLALL 193
>07_03_1565 - 27760407-27760463,27760905-27761513
Length = 221
Score = 37.1 bits (82), Expect = 0.015
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2
Query: 296 TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 394
++PQ+ + G VGG +VK L+ESG+L +L G
Sbjct: 122 SLPQLLVGGRLVGGADEVKQLHESGQLRRLLDG 154
>05_05_0177 - 22993844-22994617
Length = 257
Score = 36.7 bits (81), Expect = 0.019
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 299 VPQVFINGNCVGGGSDVKALYESGKL 376
+PQVF+NG +GG +V+ L+ESG+L
Sbjct: 167 LPQVFVNGRHLGGAEEVRRLHESGEL 192
>04_04_1325 + 32666302-32667633
Length = 443
Score = 36.7 bits (81), Expect = 0.019
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Frame = +2
Query: 227 IELNERDDGN--TIQDNLAQLTG-----FRTVPQVFINGNCVGGGSDVKALYESGKLEPM 385
+ L+ERD + LA+L G +P+VF++G +GG DV AL+E+ +L M
Sbjct: 316 VRLDERDVSMHAVFRAELAELLGPGGFACAALPRVFVDGRYLGGAEDVHALHEAAELARM 375
Query: 386 LIG 394
L G
Sbjct: 376 LEG 378
>02_01_0017 - 112766-113650
Length = 294
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2
Query: 299 VPQVFINGNCVGGGSDVKALYESGKLEPMLIG 394
VP++F+ GN VGG ++V L E GKL +L G
Sbjct: 190 VPRLFVRGNHVGGAAEVARLEEEGKLAALLEG 221
>01_05_0190 +
19085897-19085968,19086269-19086344,19086945-19086997,
19087270-19087419,19087553-19087652,19087740-19087806,
19088315-19088397,19088497-19088510
Length = 204
Score = 35.9 bits (79), Expect = 0.034
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 71 TRSSKMAGSVDIQQFIKEAISKDKVVVFSKSY--CPYCKLAKDVFEKVKQPIKVIELNER 244
T+SS M+ + Q IKE + V+++ K Y P C + +KQ I +
Sbjct: 104 TKSSNMSFDDIVSQDIKE----NPVLIYMKGYPDAPRCGFSALAVRVLKQYDVPISARDI 159
Query: 245 DDGNTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYES 367
+++++ T + T PQ+FI G VGG + ++++
Sbjct: 160 LGDLKLKESVKAHTNWPTFPQIFIKGEFVGGSDIILDMHQA 200
>05_03_0650 - 16582296-16583042
Length = 248
Score = 34.3 bits (75), Expect = 0.10
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 299 VPQVFINGNCVGGGSDVKALYESGKLEPMLIG 394
+PQ+F+ G VG +V+ L+ESG+L ++ G
Sbjct: 159 LPQLFVGGRLVGDADEVRLLHESGELHRVVAG 190
>02_05_0750 - 31479876-31480985
Length = 369
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +2
Query: 296 TVPQVFINGNCVGGGSDVKALYESGKLEPML 388
++PQVF +G +GG +V+ ++ESG+L L
Sbjct: 274 SLPQVFADGRHLGGAEEVRRMHESGELSKAL 304
>10_08_0410 -
17716370-17716743,17716839-17716939,17717104-17717300,
17717392-17717677,17717768-17718004,17718226-17718281,
17720042-17721226
Length = 811
Score = 32.7 bits (71), Expect = 0.32
Identities = 22/82 (26%), Positives = 37/82 (45%)
Frame = +2
Query: 134 KDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLTGFRTVPQVF 313
K +V FS+S C C + F + P I L+ + + ++ VPQ+F
Sbjct: 232 KGRVSFFSRSGCRDCAAVRAFFRQSALPYVEINLDVFPEREA--EFASRAGASARVPQIF 289
Query: 314 INGNCVGGGSDVKALYESGKLE 379
+N +GG + +L SG+ E
Sbjct: 290 LNEKLLGGLVVLNSLRNSGEFE 311
>03_05_0501 - 24944533-24945507
Length = 324
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +2
Query: 302 PQVFINGNCVGGGSDVKALYESGKLEPML 388
P++F++G +GG ++V L+E +L P+L
Sbjct: 235 PRLFVDGRYLGGANEVVTLHEQARLRPVL 263
>03_02_1040 + 13601779-13602390
Length = 203
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 296 TVPQVFINGNCVGGGSDVKALYESGKLEPMLIG 394
++PQ+ + VGG +V+ L+E+G+L +L G
Sbjct: 114 SLPQLLVGARLVGGADEVRQLHEAGELRRLLEG 146
>05_07_0123 + 27847555-27847953
Length = 132
Score = 31.5 bits (68), Expect = 0.73
Identities = 24/94 (25%), Positives = 45/94 (47%)
Frame = +2
Query: 107 QQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLT 286
++ ++ A+++ VVV +S C C V +++ Q + V G +
Sbjct: 35 EEEVRRAVAECPVVVVGRSGC--C--LSHVVKRLLQGLGVNPAVHEVAGEAELAGVVAGG 90
Query: 287 GFRTVPQVFINGNCVGGGSDVKALYESGKLEPML 388
G +P VF+ G +GG + A++ SG+L P+L
Sbjct: 91 GGVALPAVFVGGRLLGGLDRLMAVHISGELVPIL 124
>01_01_0523 +
3837452-3837512,3837923-3838060,3838196-3838236,
3839095-3839172,3842040-3842115,3842921-3843081,
3843221-3843320,3843416-3843482,3843974-3844088,
3844156-3844221
Length = 300
Score = 31.5 bits (68), Expect = 0.73
Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 5/101 (4%)
Frame = +2
Query: 89 AGSVDIQQFIKEAISKDKVVVFSKSY-----CPYCKLAKDVFEKVKQPIKVIELNERDDG 253
+ ++ + + I ++ V+++ K + C + LA V + PI ++
Sbjct: 174 SSNMSFDDIVAQDIKENPVLIYMKGFPESPMCGFSALAVKVLKLYDVPISARDIL---GD 230
Query: 254 NTIQDNLAQLTGFRTVPQVFINGNCVGGGSDVKALYESGKL 376
+++ + T + T PQ+FI G VGG + ++++ +L
Sbjct: 231 LKLKECVKAHTNWPTFPQIFIKGEFVGGSDIILDMHQASEL 271
>05_01_0410 -
3234455-3234466,3234851-3234950,3235037-3235161,
3235244-3235400,3235644-3235735,3235828-3235855,
3235949-3236066,3236411-3236466,3236556-3236653,
3236864-3236948,3237428-3237600
Length = 347
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +2
Query: 131 SKDKVVVFSKSYCPYCKLAKDVFEKV----KQPIKVIELNERDDGNTIQDNLAQLTGFRT 298
+KD +V F +C +CK ++EK+ KQ V+ N D +T ++GF T
Sbjct: 166 TKDVLVEFYAPWCGHCKHLAPIYEKLASVYKQDEGVVIANLDADKHTALAEKYGVSGFPT 225
Query: 299 VPQVFINGNCVGGGSD 346
+ + F GN G D
Sbjct: 226 L-KFFPKGNKAGEDYD 240
>01_01_0989 + 7816812-7817195
Length = 127
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 302 PQVFINGNCVGGGSDVKALYESGKLEPML 388
P VFI G VGG + A++ +G+L P+L
Sbjct: 91 PAVFIGGRLVGGLDRLMAMHMAGELVPVL 119
>12_02_0670 -
21700523-21700932,21701266-21701390,21701476-21701651,
21702937-21703128
Length = 300
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +2
Query: 89 AGSVDIQQFIKEAISKDK--VVVFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTI 262
A ++ ++ +KE K++ V+F S+CP+ + + VF+ + I+ + N +
Sbjct: 62 AEEINGEELVKELSGKEECTAVLFYASWCPFSQRMRPVFDDLSSMFPRIKHLAVEQTNAM 121
Query: 263 QDNLAQLTGFRTVPQVFI 316
L++ G R+ P + I
Sbjct: 122 PAVLSRY-GVRSFPSILI 138
>10_08_0426 - 17817975-17818582,17819068-17819209,17819648-17819745,
17820070-17821897,17822331-17822738,17822891-17822943,
17823461-17823877,17824401-17824605
Length = 1252
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 116 IKEAISKDKVVVFSKSYCPYCKLAKDVFEKVKQPIK 223
I A KD +V+FS S+C +C+ + V +V + K
Sbjct: 917 ISSAWKKDVLVLFSNSWCGFCQRTELVVREVYRSFK 952
>02_05_0727 + 31264798-31265297,31265962-31266417,31266503-31266938
Length = 463
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +2
Query: 44 YMGSQSGKITRSSKMAGSVDIQQFIKEAISKDKVVVFSKSYCPYCKLAKDVFEKV 208
Y ++SG++ + +AGS + + ++E+ + + F + Y P K+ DV +KV
Sbjct: 343 YFAAKSGRMCAEAIVAGSANGTRMVEESDLRRYLAEFDRLYWPTYKVL-DVLQKV 396
>01_06_0189 - 27319698-27320141
Length = 147
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 299 VPQVFINGNCVGGGSDVKALYESGKLEPML 388
+P VF+ G +GG + A++ SG+L P+L
Sbjct: 110 LPAVFVGGKLLGGLDRLMAVHISGELVPIL 139
>01_01_0997 +
7884974-7885043,7885689-7885975,7886056-7886311,
7886455-7886537,7886634-7886687,7887941-7888012,
7889093-7889155,7889274-7889324,7889432-7889513,
7889606-7889701,7889774-7889944,7890024-7890130,
7890229-7890326,7890798-7891048,7891235-7891398,
7891689-7891979,7892067-7892377,7892477-7892655,
7893231-7893301
Length = 918
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 149 VFSKSYCPYCKLAKDVFEKVKQPIKVIELNERDDGNTIQDNLAQLT 286
VF KS PY +L K +F++VK + ++ +DD + DN+ L+
Sbjct: 303 VFLKSTLPYKEL-KSMFQEVKIDFRTLKTQFQDDIIKLGDNVQGLS 347
>01_01_0957 + 7516314-7517489
Length = 391
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 302 PQVFINGNCVGGGSDVKALYESGKLEPML 388
P++F+ G +GG L ESGKL M+
Sbjct: 295 PRLFVMGRYLGGADACAELAESGKLREMM 323
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,867,176
Number of Sequences: 37544
Number of extensions: 338996
Number of successful extensions: 852
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -